RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KANSL2Q9H9L4 492 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 MYADML2A6NDP7 307 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 ARVCFO00192 962 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 CD4P01730 458 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 EEF2P13639 858 aaKnown RBP17.79■□□□□ 0.44
RTN3-214ENST00000545432 CSF2RAP15509 400 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 PLA2G5P39877 138 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 PSRC1Q6PGN9 363 aaPredicted RBP17.79■□□□□ 0.44
RTN3-214ENST00000545432 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 AACSQ86V21 672 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 FAM126BQ8IXS8 530 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 TMEM199Q8N511 208 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 PCSK9Q8NBP7 692 aaKnown RBP17.79■□□□□ 0.44
RTN3-214ENST00000545432 ADAMTS19Q8TE59 1207 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 GLT1D1Q96MS3 346 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 RAPGEFL1Q9UHV5 662 aa17.79■□□□□ 0.44
RTN3-214ENST00000545432 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
RTN3-214ENST00000545432 CTAGE5O15320 804 aa17.78■□□□□ 0.44
RTN3-214ENST00000545432 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
RTN3-214ENST00000545432 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.78■□□□□ 0.44
RTN3-214ENST00000545432 TEX13BQ9BXU2 312 aa17.78■□□□□ 0.44
RTN3-214ENST00000545432 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 BDP1A6H8Y1 2624 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 A0A0U1RQG5 324 aaPredicted RBP17.77■□□□□ 0.44
RTN3-214ENST00000545432 ADCY6O43306 1168 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 PRKAB2O43741 272 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 ASGR1P07306 291 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 IRX5P78411 483 aaPredicted RBP17.77■□□□□ 0.44
RTN3-214ENST00000545432 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 RAB30Q15771 203 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 FGD4Q96M96 766 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 UHRF1Q96T88 793 aaPredicted RBP17.77■□□□□ 0.44
RTN3-214ENST00000545432 IL23AQ9NPF7 189 aa17.77■□□□□ 0.44
RTN3-214ENST00000545432 ARIH1Q9Y4X5 557 aaPredicted RBP17.77■□□□□ 0.44
RTN3-214ENST00000545432 NAV1Q8NEY1 1877 aa17.77■□□□□ 0.43
RTN3-214ENST00000545432 ADD2P35612 726 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 KATNBL1Q9H079 304 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
RTN3-214ENST00000545432 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
RTN3-214ENST00000545432 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 CHD9Q3L8U1 2897 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 USP17L12C9JPN9 530 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 USP17L21D6R901 530 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 BMP1P13497 986 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 FAM83BQ5T0W9 1011 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
RTN3-214ENST00000545432 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 EXOC6BQ9Y2D4 811 aa17.75■□□□□ 0.43
RTN3-214ENST00000545432 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
RTN3-214ENST00000545432 GOLIM4O00461 696 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 ACRP10323 421 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 RLBP1P12271 317 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 POU3F3P20264 500 aaPredicted RBP17.74■□□□□ 0.43
RTN3-214ENST00000545432 HOXD11P31277 338 aaPredicted RBP17.74■□□□□ 0.43
RTN3-214ENST00000545432 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 PRPF38AQ8NAV1 312 aaKnown RBP17.74■□□□□ 0.43
RTN3-214ENST00000545432 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 SLF1Q9BQI6 1058 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 NYAP2Q9P242 653 aa17.74■□□□□ 0.43
RTN3-214ENST00000545432 YBX2Q9Y2T7 364 aaKnown RBP17.74■□□□□ 0.43
RTN3-214ENST00000545432 CYP2D7A0A087X1C5 515 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 FGBP02675 491 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 C6orf222P0C671 652 aaPredicted RBP17.73■□□□□ 0.43
RTN3-214ENST00000545432 CCDC144BQ3MJ40 725 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
RTN3-214ENST00000545432 VWCEQ96DN2 955 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 SEZ6LQ9BYH1 1024 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 SPC25Q9HBM1 224 aa17.73■□□□□ 0.43
RTN3-214ENST00000545432 ZHX1Q9UKY1 873 aaPredicted RBP17.73■□□□□ 0.43
RTN3-214ENST00000545432 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
RTN3-214ENST00000545432 MBD4O95243 580 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 GNASQ5JWF2 1037 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 SNRNP48Q6IEG0 339 aaKnown RBP17.72■□□□□ 0.43
RTN3-214ENST00000545432 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 C1QTNF1Q9BXJ1 281 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 SLC28A3Q9HAS3 691 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
RTN3-214ENST00000545432 F5H6K3 240 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 CABYRO75952 493 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 CYP2C18P33260 490 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 KLRC3Q07444 240 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 SLFNL1Q499Z3 407 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 MKL1Q969V6 931 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 FAM122AQ96E09 287 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 PPP1R12CQ9BZL4 782 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 MTIF3Q9H2K0 278 aaKnown RBP17.71■□□□□ 0.43
RTN3-214ENST00000545432 SLC38A10Q9HBR0 1119 aa17.71■□□□□ 0.43
RTN3-214ENST00000545432 FBXO40Q9UH90 709 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms