RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 CAPN2P17655 700 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 PDE4AP27815 886 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 CNGA1P29973 690 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 HAND2P61296 217 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 OLFML2BQ68BL8 750 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 ABRAQ8N0Z2 381 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 PRPF38AQ8NAV1 312 aaKnown RBP12.7□□□□□ -0.38
CHEK1-218ENST00000544373 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 PFASO15067 1338 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 EVI5O60447 810 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 CYBAP13498 195 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 MCCP23508 829 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
CHEK1-218ENST00000544373 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 MMP19Q99542 508 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
CHEK1-218ENST00000544373 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 CCDC171Q6TFL3 1326 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 ORC4O43929 436 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 COL6A1P12109 1028 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 BMP3P12645 472 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 CWC27Q6UX04 472 aaKnown RBP12.69□□□□□ -0.38
CHEK1-218ENST00000544373 TICAM2Q86XR7 235 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 SLC38A10Q9HBR0 1119 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
CHEK1-218ENST00000544373 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
CHEK1-218ENST00000544373 KCTD2Q14681 263 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 RRP12Q5JTH9 1297 aaKnown RBP12.68□□□□□ -0.38
CHEK1-218ENST00000544373 KCTD1Q719H9 257 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 IL25Q9H293 177 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
CHEK1-218ENST00000544373 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 ZBED4O75132 1171 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 TAL1P17542 331 aaPredicted RBP12.67□□□□□ -0.38
CHEK1-218ENST00000544373 SLC1A4P43007 532 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 NOVP48745 357 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 SNAP25P60880 206 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 SLC5A4Q9NY91 659 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
CHEK1-218ENST00000544373 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
CHEK1-218ENST00000544373 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
CHEK1-218ENST00000544373 C7orf61Q8IZ16 206 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 DIAPH3Q9NSV4 1193 aa12.67□□□□□ -0.38
CHEK1-218ENST00000544373 ZMYM6O95789 1325 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 STAT2P52630 851 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 LRRC26Q2I0M4 334 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
CHEK1-218ENST00000544373 STAG1Q8WVM7 1258 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 AGBL1Q96MI9 1066 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
CHEK1-218ENST00000544373 CTDP1Q9Y5B0 961 aaPredicted RBP12.66□□□□□ -0.38
CHEK1-218ENST00000544373 ZNF536O15090 1300 aa12.66□□□□□ -0.38
CHEK1-218ENST00000544373 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 SEPT4O43236 478 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 MSCO60682 206 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 SYN1P17600 705 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 COPB2P35606 906 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHEK1-218ENST00000544373 IKQ13123 557 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-218ENST00000544373 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 RCSD1Q6JBY9 416 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-218ENST00000544373 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 NEDD4P46934 1319 aa12.65□□□□□ -0.38
CHEK1-218ENST00000544373 DNAJC25-GNG10A0A024R161 153 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 CHURC1Q8WUH1 139 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 FGD4Q96M96 766 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
CHEK1-218ENST00000544373 DIS3Q9Y2L1 958 aaKnown RBP12.64□□□□□ -0.39
CHEK1-218ENST00000544373 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-218ENST00000544373 SNAI1O95863 264 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-218ENST00000544373 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-218ENST00000544373 SLC16A2P36021 539 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms