RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 GRM4Q14833 912 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 ERO1BQ86YB8 467 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 ZNF280CQ8ND82 737 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 VCPKMTQ9H867 229 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 GOPCQ9HD26 462 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 FAM217BQ9NTX9 383 aaPredicted RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 AFG3L2Q9Y4W6 797 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 PHIPQ8WWQ0 1821 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 CPLX1O14810 134 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 PPFIA3O75145 1194 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 NDUFB10O96000 172 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 PARP1P09874 1014 aaKnown RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 PDHBP11177 359 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 KIF5BP33176 963 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 HUNKP57058 714 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 PPATQ06203 517 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 MTMR2Q13614 643 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 HABP4Q5JVS0 413 aaKnown RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 KIAA1755Q5JYT7 1200 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 SPICE1Q8N0Z3 855 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 GMCL1P1Q8NEA9 526 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 DCAF4Q8WV16 495 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 OPTNQ96CV9 577 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 MAP3K14Q99558 947 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 NUP88Q99567 741 aaPredicted RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 SYNPO2Q9UMS6 1093 aa11.04□□□□□ -0.64
SP140-214ENST00000544128 FRMPD2Q68DX3 1309 aaPredicted RBP11.04□□□□□ -0.64
SP140-214ENST00000544128 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
SP140-214ENST00000544128 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 PLEKHA8P1O95397 391 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 BMP3P12645 472 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 SLC1A4P43007 532 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 USP14P54578 494 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 HMGCS2P54868 508 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 BACE1P56817 501 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
SP140-214ENST00000544128 PPIL2Q13356 520 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
SP140-214ENST00000544128 KCTD1Q719H9 257 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
SP140-214ENST00000544128 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 GMCL1Q96IK5 515 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 NID2Q14112 1375 aa11.03□□□□□ -0.64
SP140-214ENST00000544128 A0A0C4DFX4 3053 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 KLRF2D3W0D1 207 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 CXCL11O14625 94 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 IRF6O14896 467 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 JAK2O60674 1132 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 CTDNEP1O95476 244 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 GJA5P36382 358 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 GNAQP50148 359 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 NTRK3Q16288 839 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 ASPRV1Q53RT3 343 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 TMTC3Q6ZXV5 915 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 NBPF11Q86T75 865 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 SRBD1Q8N5C6 995 aaKnown RBP11.02□□□□□ -0.65
SP140-214ENST00000544128 NSUN7Q8NE18 718 aaKnown RBP11.02□□□□□ -0.65
SP140-214ENST00000544128 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.65
SP140-214ENST00000544128 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 CPVLQ9H3G5 476 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.65
SP140-214ENST00000544128 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.65
SP140-214ENST00000544128 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 DPYSL4O14531 572 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 CDKL5O76039 1030 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 IFNAR1P17181 557 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 SLC16A2P36021 539 aa11.01□□□□□ -0.65
SP140-214ENST00000544128 ZNF157P51786 506 aaPredicted RBP11.01□□□□□ -0.65
SP140-214ENST00000544128 SSRP1Q08945 709 aaKnown RBP11.01□□□□□ -0.65
SP140-214ENST00000544128 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
SP140-214ENST00000544128 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms