RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 ARHGEF10LQ9HCE6 1279 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 ZHX1Q9UKY1 873 aaPredicted RBP13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 TMX2Q9Y320 296 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 LRRC37A2A6NM11 1700 aa13.72□□□□□ -0.21
AP000439.1-201ENST00000544004 MYOGP15173 224 aa13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 CST5P28325 142 aaPredicted RBP13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 STAT3P40763 770 aa13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 MSL3Q8N5Y2 521 aaKnown RBP13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
AP000439.1-201ENST00000544004 RFXAPO00287 272 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 CD4P01730 458 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 ICA1Q05084 483 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 OS9Q13438 667 aaPredicted RBP13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 SH2D4AQ9H788 454 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 SPC25Q9HBM1 224 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 C11orf16Q9NQ32 467 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 ZNF214Q9UL59 606 aaPredicted RBP13.7□□□□□ -0.22
AP000439.1-201ENST00000544004 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 MCM3APO60318 1980 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 FAM86C2PA6NEL3 165 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 VWA5AO00534 786 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 ADCY6O43306 1168 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 TLL1O43897 1013 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 GPR37L1O60883 481 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 COPB2P35606 906 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 MAMDC4Q6UXC1 1216 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 CCDC8Q9H0W5 538 aaPredicted RBP13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 HIPK3Q9H422 1215 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 SLC4A7Q9Y6M7 1214 aa13.69□□□□□ -0.22
AP000439.1-201ENST00000544004 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 AKR1B1P15121 316 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 POU3F3P20264 500 aaPredicted RBP13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 CCL23P55773 120 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 GJA9P57773 515 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 ACVR2BQ13705 512 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 CCDC144BQ3MJ40 725 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 REPS2Q8NFH8 660 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 UPF3AQ9H1J1 476 aaKnown RBP13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 SWAP70Q9UH65 585 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 COG5Q9UP83 839 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 TRANK1O15050 2925 aa13.68□□□□□ -0.22
AP000439.1-201ENST00000544004 DNAJC25-GNG10A0A024R161 153 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 SURF6O75683 361 aaKnown RBP13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 CYP2D6P10635 497 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
AP000439.1-201ENST00000544004 CTAGE5O15320 804 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 RAD21O60216 631 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 BEX3Q00994 111 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 POLA2Q14181 598 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 KRT40Q6A162 431 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 TRMT2AQ8IZ69 625 aaKnown RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 WNT8AQ9H1J5 351 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
AP000439.1-201ENST00000544004 BAZ2AQ9UIF9 1905 aaKnown RBP13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 CA3P07451 260 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 CXCL17Q6UXB2 119 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 SLC43A3Q8NBI5 491 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 HLA-CQ95604 372 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
AP000439.1-201ENST00000544004 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 PI4K2BG5E9Z4 385 aa13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 SSH3Q8TE77 659 aa13.64□□□□□ -0.23
AP000439.1-201ENST00000544004 VWCEQ96DN2 955 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms