RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 TTBK2Q6IQ55 1244 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 NOL8Q76FK4 1167 aaKnown RBP7.36□□□□□ -1.23
LTBR-212ENST00000543542 MICU3Q86XE3 530 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 CPXCR1Q8N123 301 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 GPRC5AQ8NFJ5 357 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 ERO1AQ96HE7 468 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 UBA5Q9GZZ9 404 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 R3HDMLQ9H3Y0 253 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 ZSWIM6Q9HCJ5 1215 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 VAT1LQ9HCJ6 419 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 RABGAP1Q9Y3P9 1069 aa7.36□□□□□ -1.23
LTBR-212ENST00000543542 COL11A1P12107 1806 aaPredicted RBP7.36□□□□□ -1.23
LTBR-212ENST00000543542 MYPNQ86TC9 1320 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 KLRF2D3W0D1 207 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 VWA5AO00534 786 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 PEX10O60683 326 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 FDX1P10109 184 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 GNAQP50148 359 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 METAP2P50579 478 aaKnown RBP eCLIP7.35□□□□□ -1.23
LTBR-212ENST00000543542 FCGRTP55899 365 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 SNAP25P60880 206 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 ERVK-9P63128 1117 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 ERVK-24P63145 666 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 STK3Q13188 491 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 COL9A3Q14050 684 aaPredicted RBP7.35□□□□□ -1.23
LTBR-212ENST00000543542 GRM4Q14833 912 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 ANKRD1Q15327 319 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 RTN1Q16799 776 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 FAM110CQ1W6H9 321 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 C17orf99Q6UX52 265 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 NCAPG2Q86XI2 1143 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 MB21D1Q8N884 522 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 CD99L2Q8TCZ2 262 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 ZNF296Q8WUU4 475 aaPredicted RBP7.35□□□□□ -1.23
LTBR-212ENST00000543542 PIBF1Q8WXW3 757 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 LARP6Q9BRS8 491 aaKnown RBP7.35□□□□□ -1.23
LTBR-212ENST00000543542 CFHR5Q9BXR6 569 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 PARP14Q460N5 1801 aa7.35□□□□□ -1.23
LTBR-212ENST00000543542 TNPO2O14787 897 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 ST18O60284 1047 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 PLA2G6O60733 806 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 SNHG28P0DPA3 235 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 BCRP11274 1271 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 ALAS1P13196 640 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 HOXD10P28358 340 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 MAPK4P31152 587 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 STAT3P40763 770 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 PSMC4P43686 418 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 RBM25P49756 843 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 AK2P54819 239 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 TROAPQ12815 778 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 TMEM132BQ14DG7 1078 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 RABEP1Q15276 862 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 SNRNP48Q6IEG0 339 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 APOA5Q6Q788 366 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 LBX2Q6XYB7 198 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 SGMS1Q86VZ5 419 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 HOMER1Q86YM7 354 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 ADGRF4Q8IZF3 695 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 CCDC82Q8N4S0 544 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 FANCBQ8NB91 859 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 COA7Q96BR5 231 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 LZTS2Q9BRK4 669 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 SPATC1LQ9H0A9 340 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 CPVLQ9H3G5 476 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 EFCC1Q9HA90 598 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 RAVER2Q9HCJ3 691 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 HOMER2Q9NSB8 354 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 RBM28Q9NW13 759 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 BTBD7Q9P203 1132 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 SEC63Q9UGP8 760 aaKnown RBP7.34□□□□□ -1.23
LTBR-212ENST00000543542 MAD2L2Q9UI95 211 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 CCPG1Q9ULG6 757 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 MYH6P13533 1939 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 MGAMO43451 1857 aa7.34□□□□□ -1.23
LTBR-212ENST00000543542 PCNTO95613 3336 aa7.34□□□□□ -1.24
LTBR-212ENST00000543542 CASP8AP2Q9UKL3 1982 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 A0A0G2JMZ2 1700 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 RLFQ13129 1914 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 CCDC196A0A1B0GTZ2 297 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 CPLX1O14810 134 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 SLC25A27O95847 323 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 COPB2P35606 906 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 CCT2P78371 535 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 LACTBP83111 547 aaPredicted RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 AKAP17AQ02040 695 aaKnown RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 TOB2Q14106 344 aaPredicted RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 CDC37Q16543 378 aaPredicted RBP7.33□□□□□ -1.24
LTBR-212ENST00000543542 Q3C1V9 767 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 USH1GQ495M9 461 aa7.33□□□□□ -1.24
LTBR-212ENST00000543542 NOM1Q5C9Z4 860 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms