RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 H0YGN5 161 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 BMP3P12645 472 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 CYBAP13498 195 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 CHMP4CQ96CF2 233 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 SLC38A10Q9HBR0 1119 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 FEM1BQ9UK73 627 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 FCER1AP12319 257 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 TTC22Q5TAA0 569 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 KIFC2Q96AC6 838 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 DIAPH3Q9NSV4 1193 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 STX8Q9UNK0 236 aa22.03■■□□□ 1.12
TMED3-204ENST00000543455 ATP2A1O14983 1001 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 PGK2P07205 417 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 SNRNP48Q6IEG0 339 aaKnown RBP22.02■■□□□ 1.12
TMED3-204ENST00000543455 STAG1Q8WVM7 1258 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 DPF3Q92784 378 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 MAML3Q96JK9 1138 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 MMP19Q99542 508 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 HTATIP2Q9BUP3 242 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
TMED3-204ENST00000543455 TMEM232C9JQI7 657 aa22.01■■□□□ 1.11
TMED3-204ENST00000543455 MCCP23508 829 aa22.01■■□□□ 1.11
TMED3-204ENST00000543455 RRP12Q5JTH9 1297 aaKnown RBP22.01■■□□□ 1.11
TMED3-204ENST00000543455 AKNAD1Q5T1N1 836 aa22.01■■□□□ 1.11
TMED3-204ENST00000543455 NECAB2Q7Z6G3 386 aa22.01■■□□□ 1.11
TMED3-204ENST00000543455 RAVER2Q9HCJ3 691 aaKnown RBP22.01■■□□□ 1.11
TMED3-204ENST00000543455 SMCHD1A6NHR9 2005 aa22■■□□□ 1.11
TMED3-204ENST00000543455 PFASO15067 1338 aa22■■□□□ 1.11
TMED3-204ENST00000543455 NEDD4P46934 1319 aa22■■□□□ 1.11
TMED3-204ENST00000543455 MFAP1P55081 439 aaKnown RBP22■■□□□ 1.11
TMED3-204ENST00000543455 ZNF792Q3KQV3 632 aa22■■□□□ 1.11
TMED3-204ENST00000543455 TCP11L1Q9NUJ3 509 aa22■■□□□ 1.11
TMED3-204ENST00000543455 HIP1O00291 1037 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 COL6A1P12109 1028 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 COPB2P35606 906 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 SLC1A4P43007 532 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 PPP4R3BQ5MIZ7 849 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 PRAMEF19Q5SWL8 479 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 RCSD1Q6JBY9 416 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 KCTD1Q719H9 257 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 CPXCR1Q8N123 301 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 TOMM22Q9NS69 142 aa21.99■■□□□ 1.11
TMED3-204ENST00000543455 DDX20Q9UHI6 824 aaKnown RBP21.99■■□□□ 1.11
TMED3-204ENST00000543455 ZNF536O15090 1300 aa21.98■■□□□ 1.11
TMED3-204ENST00000543455 ZBED4O75132 1171 aa21.98■■□□□ 1.11
TMED3-204ENST00000543455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.98■■□□□ 1.11
TMED3-204ENST00000543455 TMEM47Q9BQJ4 181 aa21.98■■□□□ 1.11
TMED3-204ENST00000543455 DSCC1Q9BVC3 393 aa21.98■■□□□ 1.11
TMED3-204ENST00000543455 DNAJC25-GNG10A0A024R161 153 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 PLA2G6O60733 806 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 STAT2P52630 851 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 KCTD2Q14681 263 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 C11orf49Q9H6J7 331 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 SLC5A4Q9NY91 659 aa21.97■■□□□ 1.11
TMED3-204ENST00000543455 RANBP2P49792 3224 aaKnown RBP21.97■■□□□ 1.11
TMED3-204ENST00000543455 MFSD6Q6ZSS7 791 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 COLQQ9Y215 455 aaPredicted RBP21.96■■□□□ 1.11
TMED3-204ENST00000543455 DIS3Q9Y2L1 958 aaKnown RBP21.96■■□□□ 1.11
TMED3-204ENST00000543455 MCM3APO60318 1980 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 PCP11498 1178 aaKnown RBP21.96■■□□□ 1.11
TMED3-204ENST00000543455 CNGA1P29973 690 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 OAZ1P54368 228 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 SNAP25P60880 206 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 CHURC1Q8WUH1 139 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 FGD4Q96M96 766 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
TMED3-204ENST00000543455 TRIOBPQ9H2D6 2365 aa21.95■■□□□ 1.11
TMED3-204ENST00000543455 ZNF213O14771 459 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 TOP1P11387 765 aaKnown RBP21.95■■□□□ 1.1
TMED3-204ENST00000543455 TAL1P17542 331 aaPredicted RBP21.95■■□□□ 1.1
TMED3-204ENST00000543455 SLC4A3P48751 1232 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 HABP4Q5JVS0 413 aaKnown RBP21.95■■□□□ 1.1
TMED3-204ENST00000543455 TTBK2Q6IQ55 1244 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 DCAF4Q8WV16 495 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 AGBL1Q96MI9 1066 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 TINF2Q9BSI4 451 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 PRR12Q9ULL5 1215 aa21.95■■□□□ 1.1
TMED3-204ENST00000543455 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
TMED3-204ENST00000543455 LCTP09848 1927 aa21.94■■□□□ 1.1
TMED3-204ENST00000543455 SEPT4O43236 478 aa21.94■■□□□ 1.1
TMED3-204ENST00000543455 EVI5O60447 810 aa21.94■■□□□ 1.1
TMED3-204ENST00000543455 CHMLP26374 656 aa21.94■■□□□ 1.1
TMED3-204ENST00000543455 ANO1Q5XXA6 986 aa21.94■■□□□ 1.1
TMED3-204ENST00000543455 DNAH12Q6ZR08 3092 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 MSCO60682 206 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 SLC34A2O95436 690 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 FDX1P10109 184 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 BTNL9Q6UXG8 535 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 ZKSCAN3Q9BRR0 538 aa21.93■■□□□ 1.1
TMED3-204ENST00000543455 RNF41Q9H4P4 317 aaPredicted RBP21.93■■□□□ 1.1
TMED3-204ENST00000543455 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
TMED3-204ENST00000543455 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
TMED3-204ENST00000543455 PRO3102Q9H379 93 aa21.92■■□□□ 1.1
TMED3-204ENST00000543455 CTDP1Q9Y5B0 961 aaPredicted RBP21.92■■□□□ 1.1
TMED3-204ENST00000543455 NR2E3Q9Y5X4 410 aa21.92■■□□□ 1.1
TMED3-204ENST00000543455 RAD50Q92878 1312 aa21.92■■□□□ 1.1
TMED3-204ENST00000543455 KDM4AO75164 1064 aa21.91■■□□□ 1.1
TMED3-204ENST00000543455 ZNF865P0CJ78 1059 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms