RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 SLFN14P0C7P3 912 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 MRPL12P52815 198 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 U2AF1L4Q8WU68 220 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 ZSCAN10Q96SZ4 725 aaPredicted RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 REXO1Q8N1G1 1221 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 CCDC63Q8NA47 563 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 OSBPL5Q9H0X9 879 aaPredicted RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 SYNCQ9H7C4 482 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 DENND2AQ9ULE3 1009 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 RIPOR2Q9Y4F9 1068 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 NEBLO76041 1014 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 FTCDO95954 541 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 SEL1L2Q5TEA6 688 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 PNMA1Q8ND90 353 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 TTC16Q8NEE8 873 aa15.3■□□□□ 0.04
RPS6KC1-206ENST00000543354 SCG2P13521 617 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 CCZ1BP86790 482 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 CCZ1P86791 482 aaPredicted RBP15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 PDCLQ13371 301 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 SMCR8Q8TEV9 937 aaPredicted RBP15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 TCP11Q8WWU5 503 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 FLOT1O75955 427 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 PDE8BO95263 885 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 CAPN12Q6ZSI9 719 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 STOX1Q6ZVD7 989 aa15.29■□□□□ 0.04
RPS6KC1-206ENST00000543354 RGS16O15492 202 aaPredicted RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 MOCS3O95396 460 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 KRT31Q15323 416 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 DDB1Q16531 1140 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 MYCBPQ99417 103 aaPredicted RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 TPTE2Q6XPS3 522 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 ANKRD7Q92527 254 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 MMP1P03956 469 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 KRT5P13647 590 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 CTSWP56202 376 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 TRIM68Q6AZZ1 485 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 ARHGEF2Q92974 986 aaKnown RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 A6NNZ2 444 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 GCNT3O95395 438 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 HARSP12081 509 aaKnown RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 TUBB8Q3ZCM7 444 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 GKAP1Q5VSY0 366 aaPredicted RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
RPS6KC1-206ENST00000543354 ATP2A1O14983 1001 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 PPP1R2P41236 205 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 ZNF131P52739 623 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 VWA3BQ502W6 1294 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 STIM2Q9P246 746 aa15.27■□□□□ 0.04
RPS6KC1-206ENST00000543354 TRIM49BA6NDI0 452 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 ZNF365Q70YC5 407 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 SYNE4Q8N205 404 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 BTG4Q9NY30 223 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 MFAP3LO75121 409 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 IFNAR1P17181 557 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 DESP17661 470 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 PPP2R5BQ15173 497 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 USH1GQ495M9 461 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 KRT25Q7Z3Z0 450 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 SUGCTQ9HAC7 445 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 SWAP70Q9UH65 585 aa15.27■□□□□ 0.03
RPS6KC1-206ENST00000543354 KLRF2D3W0D1 207 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 GOLGA8KD6RF30 607 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 TADA3O75528 432 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 ATP11AP98196 1134 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 DENND2CQ68D51 928 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 USTQ9Y2C2 406 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 MADDQ8WXG6 1647 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 ESYT3A0FGR9 886 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 DDX39AO00148 427 aaKnown RBP15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 NNTQ13423 1086 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 MYOCDQ8IZQ8 938 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 IFT74Q96LB3 600 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 CEP63Q96MT8 703 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 SMC6Q96SB8 1091 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
RPS6KC1-206ENST00000543354 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms