RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TMEM105	Q8N8V8	129 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.88	□□□□□ -1.15
CIT-213	ENST00000543324	EDC3	Q96F86	508 aa	Known RBP	7.88	□□□□□ -1.15
CIT-213	ENST00000543324	PPP1R12C	Q9BZL4	782 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.88	□□□□□ -1.15
CIT-213	ENST00000543324	CEP126	Q9P2H0	1117 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	FAM198A	Q9UFP1	575 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	ITPR1	Q14643	2758 aa		7.88	□□□□□ -1.15
CIT-213	ENST00000543324	RALGAPA2	Q2PPJ7	1873 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	NAV1	Q8NEY1	1877 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	WDFY3	Q8IZQ1	3526 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	IGF2R	P11717	2491 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324		A0A1B0GUL7	405 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	TRIM75P	A6NK02	468 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	TAF4	O00268	1085 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	IPO8	O15397	1037 aa	Known RBP	7.87	□□□□□ -1.15
CIT-213	ENST00000543324	SRGAP3	O43295	1099 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	PEX10	O60683	326 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	KRT38	O76015	456 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	PDGFB	P01127	241 aa	Predicted RBP	7.87	□□□□□ -1.15
CIT-213	ENST00000543324	PROS1	P07225	676 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	RLBP1	P12271	317 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	ARID4A	P29374	1257 aa	Predicted RBP	7.87	□□□□□ -1.15
CIT-213	ENST00000543324	MAP3K10	Q02779	954 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	COL19A1	Q14993	1142 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	DIXDC1	Q155Q3	683 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	FAM47A	Q5JRC9	791 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	CDC42EP5	Q6NZY7	148 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	PLEKHH3	Q7Z736	793 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	TMEM57	Q8N5G2	664 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	SSH3	Q8TE77	659 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	FAM151A	Q8WW52	585 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	FAM163A	Q96GL9	167 aa	Predicted RBP	7.87	□□□□□ -1.15
CIT-213	ENST00000543324	PORCN	Q9H237	461 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	SEMA4A	Q9H3S1	761 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
CIT-213	ENST00000543324	TXNRD2	Q9NNW7	524 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	DENND2A	Q9ULE3	1009 aa		7.87	□□□□□ -1.15
CIT-213	ENST00000543324	MYH8	P13535	1937 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	TENM4	Q6N022	2769 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	PITPNM1	O00562	1244 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	GNAI2	P04899	355 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	HOXC6	P09630	235 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	MS4A1	P11836	297 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	CYP2C18	P33260	490 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	TFCP2	Q12800	502 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	NFIA	Q12857	509 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	NBR1	Q14596	966 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	ZKSCAN2	Q63HK3	967 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	CRIPAK	Q8N1N5	446 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	GPRC5A	Q8NFJ5	357 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	KCNG4	Q8TDN1	519 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	PABPC5	Q96DU9	382 aa	Known RBP	7.86	□□□□□ -1.15
CIT-213	ENST00000543324	XAGE2	Q96GT9	111 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	IDI2	Q9BXS1	227 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	GPR108	Q9NPR9	543 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	PICK1	Q9NRD5	415 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	HECTD1	Q9ULT8	2610 aa		7.86	□□□□□ -1.15
CIT-213	ENST00000543324	IGSF10	Q6WRI0	2623 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	SI	P14410	1827 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	PARP14	Q460N5	1801 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	MROH7	Q68CQ1	1323 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	DCDC2B	A2VCK2	349 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	ZBBX	A8MT70	800 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	PHF20L1	A8MW92	1017 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	FRAT2	O75474	233 aa	Predicted RBP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	LDHB	P07195	334 aa	Known RBP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	RHBDL3	P58872	404 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	TIMM10	P62072	90 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	ATP2B2	Q01814	1243 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	MVP	Q14764	893 aa	Known RBP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	SH3BP5L	Q7L8J4	393 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	ZGPAT	Q8N5A5	531 aa	Known RBP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	VWCE	Q96DN2	955 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	CCDC136	Q96JN2	1154 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	RIPOR3	Q96MK2	946 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	SUGCT	Q9HAC7	445 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	GNL3L	Q9NVN8	582 aa	Known RBP	7.85	□□□□□ -1.15
CIT-213	ENST00000543324	ANGPTL2	Q9UKU9	493 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	ZMIZ1	Q9ULJ6	1067 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	LHX6	Q9UPM6	363 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	AKAP2	Q9Y2D5	859 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	PCDHGC5	Q9Y5F6	944 aa		7.85	□□□□□ -1.15
CIT-213	ENST00000543324	MROH7-TTC4	A0A0A0MT08	1334 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	GPR75-ASB3	A0A0A6YYF3	556 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	STXBP3	O00186	592 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	MBTPS2	O43462	519 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	ENTPD3	O75355	529 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	MCAM	P43121	646 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	RING1	Q06587	406 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	PI16	Q6UXB8	463 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	ZFPM1	Q8IX07	1006 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	DCLK2	Q8N568	766 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	NPLOC4	Q8TAT6	608 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	RUBCN	Q92622	972 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	CLUAP1	Q96AJ1	413 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.84	□□□□□ -1.15
CIT-213	ENST00000543324	HINFP	Q9BQA5	517 aa		7.84	□□□□□ -1.15
CIT-213	ENST00000543324	RTKN	Q9BST9	563 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms