RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ARMC5Q96C12 935 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 DBNDD2Q9BQY9 259 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 DENND2AQ9ULE3 1009 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 CCDC88AQ3V6T2 1871 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 TIAM2Q8IVF5 1701 aa6.17□□□□□ -1.42
CLIP1-217ENST00000543205 A0A1B0GUL6 1792 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 IQCA1LA6NCM1 817 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 UQCRFS1P1P0C7P4 283 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 RPS12P25398 132 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 GMPSP49915 693 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 SCARF1Q14162 830 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 FILIP1Q7Z7B0 1213 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 JMYQ8N9B5 988 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 TSEN2Q8NCE0 465 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 AGBL3Q8NEM8 1001 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 TBC1D22AQ8WUA7 517 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 KIFC2Q96AC6 838 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 KLRG1Q96E93 195 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 HINFPQ9BQA5 517 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 ESYT1Q9BSJ8 1104 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 RRAGCQ9HB90 399 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 POLMQ9NP87 494 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 TLR7Q9NYK1 1049 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 MYO3BQ8WXR4 1341 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 DICER1Q9UPY3 1922 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 M0R2N6 131 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 PRMT3O60678 531 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 LGR5O75473 907 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 FKBP1AP62942 108 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 TLR1Q15399 786 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 MFSD14BQ5SR56 506 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 DACT2Q5SW24 774 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 WDR66Q8TBY9 1149 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 DPF2Q92785 391 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 PURBQ96QR8 312 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 INSM2Q96T92 566 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 MXD3Q9BW11 206 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 BRINP2Q9C0B6 783 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 EGFL7Q9UHF1 273 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 CNOT7Q9UIV1 285 aaKnown RBP6.16□□□□□ -1.42
CLIP1-217ENST00000543205 HACL1Q9UJ83 578 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 FAM205AQ6ZU69 1335 aa6.16□□□□□ -1.42
CLIP1-217ENST00000543205 H7C1D1 291 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 SPINT1O43278 529 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 VEGFAP15692 232 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-217ENST00000543205 HSD3B2P26439 372 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 RASGRF1Q13972 1273 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 COL19A1Q14993 1142 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 SWI5Q1ZZU3 235 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 ERICH6BQ5W0A0 696 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 TRIM46Q7Z4K8 759 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 ZSCAN29Q8IWY8 852 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-217ENST00000543205 C16orf71Q8IYS4 520 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-217ENST00000543205 RGL4Q8IZJ4 473 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 ZGPATQ8N5A5 531 aaKnown RBP6.15□□□□□ -1.42
CLIP1-217ENST00000543205 SPATA5Q8NB90 893 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 ZNF512BQ96KM6 892 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-217ENST00000543205 NMRK2Q9NPI5 230 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 HDAC9Q9UKV0 1011 aa6.15□□□□□ -1.42
CLIP1-217ENST00000543205 F8W031 263 aaPredicted RBP6.15□□□□□ -1.43
CLIP1-217ENST00000543205 EPS15P42566 896 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 MCAMP43121 646 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 MMP14P50281 582 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 TBX4P57082 545 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 NUCB1Q02818 461 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 CHD1LQ86WJ1 897 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 KIAA0825Q8IV33 1275 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 C1orf216Q8TAB5 229 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 HMG20BQ9P0W2 317 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 PNMA2Q9UL42 364 aa6.15□□□□□ -1.43
CLIP1-217ENST00000543205 PDS5AQ29RF7 1337 aaKnown RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 LDHBP07195 334 aaKnown RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 EPHX2P34913 555 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 SMTNP53814 917 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 FOXD4Q12950 439 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 OCLNQ16625 522 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 RNF187Q5TA31 235 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 PI16Q6UXB8 463 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 PNMA8AQ86V59 439 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 CERS5Q8N5B7 392 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 RNF34Q969K3 372 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 TRIM47Q96LD4 638 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 UBA5Q9GZZ9 404 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 TAF1DQ9H5J8 278 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 ADARB2Q9NS39 739 aaKnown RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 ECHDC1Q9NTX5 307 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 ABCF2Q9UG63 623 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 SEPT3Q9UH03 358 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
CLIP1-217ENST00000543205 SALL1Q9NSC2 1324 aa6.14□□□□□ -1.43
CLIP1-217ENST00000543205 ARAP2Q8WZ64 1704 aa6.13□□□□□ -1.43
CLIP1-217ENST00000543205 SHTN1A0MZ66 631 aa6.13□□□□□ -1.43
CLIP1-217ENST00000543205 A6NJY4 79 aa6.13□□□□□ -1.43
CLIP1-217ENST00000543205 ERC2O15083 957 aa6.13□□□□□ -1.43
CLIP1-217ENST00000543205 ATP5JP18859 108 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms