RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 MYH4Q9Y623 1939 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 CYP2D7A0A087X1C5 515 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 PRKAB2O43741 272 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 FLOT1O75955 427 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 SMAD3P84022 425 aaKnown RBP14.35□□□□□ -0.11
PDE3A-202ENST00000542675 TMEM132BQ14DG7 1078 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 VARS2Q5ST30 1063 aaKnown RBP14.35□□□□□ -0.11
PDE3A-202ENST00000542675 USP38Q8NB14 1042 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 DCP1AQ9NPI6 582 aaPredicted RBP14.35□□□□□ -0.11
PDE3A-202ENST00000542675 FBXO28Q9NVF7 368 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
PDE3A-202ENST00000542675 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 CHGBP05060 677 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 NUDT7P0C024 238 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 FOSL2P15408 326 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 CEP85Q6P2H3 762 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 CERS3Q8IU89 383 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 KRTAP3-3Q9BYR6 98 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 KRTAP3-2Q9BYR7 98 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
PDE3A-202ENST00000542675 ARMT1Q9H993 441 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 PHF24Q9UPV7 400 aa14.34□□□□□ -0.11
PDE3A-202ENST00000542675 GREB1LQ9C091 1923 aaPredicted RBP14.33□□□□□ -0.11
PDE3A-202ENST00000542675 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
PDE3A-202ENST00000542675 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
PDE3A-202ENST00000542675 GRIN2CQ14957 1233 aa14.33□□□□□ -0.12
PDE3A-202ENST00000542675 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
PDE3A-202ENST00000542675 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
PDE3A-202ENST00000542675 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.12
PDE3A-202ENST00000542675 MROH8Q9H579 483 aa14.33□□□□□ -0.12
PDE3A-202ENST00000542675 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
PDE3A-202ENST00000542675 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
PDE3A-202ENST00000542675 A0A1W2PQ45 241 aaPredicted RBP14.32□□□□□ -0.12
PDE3A-202ENST00000542675 A0A1W2PQY0 241 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 APBB1O00213 710 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 GOLIM4O00461 696 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 CLTBP09497 229 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 FCER1AP12319 257 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 ICA1Q05084 483 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 MB21D1Q8N884 522 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 MMP19Q99542 508 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
PDE3A-202ENST00000542675 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 ZNF865P0CJ78 1059 aaPredicted RBP14.31□□□□□ -0.12
PDE3A-202ENST00000542675 RARBP10826 455 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 RAG1P15918 1043 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 ABRAQ8N0Z2 381 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 TINF2Q9BSI4 451 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 SLC5A4Q9NY91 659 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 TACC3Q9Y6A5 838 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 CHD9Q3L8U1 2897 aa14.31□□□□□ -0.12
PDE3A-202ENST00000542675 MYADML2A6NDP7 307 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 WDR46O15213 610 aaKnown RBP14.3□□□□□ -0.12
PDE3A-202ENST00000542675 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
PDE3A-202ENST00000542675 CDK8P49336 464 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 FAAP100Q0VG06 881 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 ZNF792Q3KQV3 632 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 FTSJ3Q8IY81 847 aaKnown RBP14.3□□□□□ -0.12
PDE3A-202ENST00000542675 RHPN1Q8TCX5 695 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 ARHGEF10LQ9HCE6 1279 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 TMEM39AQ9NV64 488 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
PDE3A-202ENST00000542675 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 ADAMTS4O75173 837 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 MBD4O95243 580 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 DNAJB2P25686 324 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 FPGSQ05932 587 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 TTF1Q15361 905 aaPredicted RBP14.29□□□□□ -0.12
PDE3A-202ENST00000542675 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 RIOX2Q8IUF8 465 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 REPS2Q8NFH8 660 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
PDE3A-202ENST00000542675 SWAP70Q9UH65 585 aa14.29□□□□□ -0.12
PDE3A-202ENST00000542675 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
PDE3A-202ENST00000542675 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 USP17L21D6R901 530 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 VWA5AO00534 786 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 ADCY6O43306 1168 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 RAD21O60216 631 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 SLC25A27O95847 323 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 PBX2P40425 430 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 STAT3P40763 770 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 RNF180Q86T96 592 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
PDE3A-202ENST00000542675 PPM1EQ8WY54 764 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.124e-7■■□□□ 12
PDE3A-202ENST00000542675 RAPGEFL1Q9UHV5 662 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 SYNRGQ9UMZ2 1314 aa14.28□□□□□ -0.12
PDE3A-202ENST00000542675 BDP1A6H8Y1 2624 aa14.27□□□□□ -0.13
PDE3A-202ENST00000542675 SNAI1O95863 264 aaPredicted RBP14.27□□□□□ -0.13
PDE3A-202ENST00000542675 AKR1A1P14550 325 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms