RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GLMNQ92990 594 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 KIFC2Q96AC6 838 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 SYTL4Q96C24 671 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 PAGE5Q96GU1 130 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CALR3Q96L12 384 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 PANX2Q96RD6 677 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 ZSCAN10Q96SZ4 725 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CDCA7Q9BWT1 371 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 CABP5Q9NP86 173 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 RBM28Q9NW13 759 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 FHOD1Q9Y613 1164 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 PDS5AQ29RF7 1337 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 COL5A3P25940 1745 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 NRAPQ86VF7 1730 aa5.91□□□□□ -1.46
ATPAF1-212ENST00000542495 PPP1R3GB7ZBB8 358 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SMIM22K7EJ46 135 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SPTLC1O15269 473 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 ORC4O43929 436 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 TPM1P09493 284 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 XBP1P17861 261 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 ABL2P42684 1182 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 ATP2C1P98194 919 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 UBE4AQ14139 1066 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 BMS1Q14692 1282 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 TERF2Q15554 542 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 ZNF827Q17R98 1081 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 TMTC3Q6ZXV5 915 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 CREBRFQ8IUR6 639 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 TRMT44Q8IYL2 757 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 NUP133Q8WUM0 1156 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SDR42E1Q8WUS8 393 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 GSDMAQ96QA5 445 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 TOMM22Q9NS69 142 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SAMSN1Q9NSI8 373 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 VPS54Q9P1Q0 977 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 ADD3Q9UEY8 706 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SPATA31A5Q5VU36 1347 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 SPATA31A7Q8IWB4 1347 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 CASZ1Q86V15 1759 aa5.9□□□□□ -1.46
ATPAF1-212ENST00000542495 MYH2Q9UKX2 1941 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 LAMB1P07942 1786 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 LOC102724428A0A0B4J2F2 783 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 LRRC10BA6NIK2 292 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 MINDY4BA8MYZ0 360 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 WNT7AO00755 349 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 ATP8B1O43520 1251 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 PLEKHA8P1O95397 391 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 HOXB1P14653 301 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CD46P15529 392 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CDK11BP21127 795 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 ATP6V1AP38606 617 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 TRAPPC10P48553 1259 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 ADKP55263 362 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 SIK1P57059 783 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 AKAP17AQ02040 695 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 PTPN21Q16825 1174 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 ARHGAP29Q52LW3 1261 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 SLC10A5Q5PT55 438 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 IFIT1BQ5T764 474 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 TMCO4Q5TGY1 634 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 RSBN1LQ6PCB5 846 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CTR9Q6PD62 1173 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CLEC4GQ6UXB4 293 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 TOGARAM2Q6ZUX3 1019 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 RSRC2Q7L4I2 434 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 FBXO33Q7Z6M2 555 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CATIPQ7Z7H3 387 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 PDILTQ8N807 584 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 UBXN4Q92575 508 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 SYMPKQ92797 1274 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 EPSTI1Q96J88 318 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 WDR24Q96S15 920 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 NAA15Q9BXJ9 866 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 UBXN6Q9BZV1 441 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 GNL3LQ9NVN8 582 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 NIP7Q9Y221 180 aaKnown RBP eCLIP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 THRAP3Q9Y2W1 955 aaKnown RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 MRFAP1Q9Y605 127 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 V9GY48 417 aaPredicted RBP5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 ITIH6Q6UXX5 1313 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 CNTNAP5Q8WYK1 1306 aa5.9□□□□□ -1.47
ATPAF1-212ENST00000542495 KIAA1551Q9HCM1 1747 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 MAST2Q6P0Q8 1798 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 AKR1B15C9JRZ8 316 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 TEX33O43247 280 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 URI1O94763 535 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 PNMA6AP0CW24 399 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 CASQ1P31415 396 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 GYG1P46976 350 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 PLA2G4AP47712 749 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 NT5C2P49902 561 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 DYNLL1P63167 89 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 QPCTQ16769 361 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 SBK1Q52WX2 424 aa5.89□□□□□ -1.47
ATPAF1-212ENST00000542495 HSP90AA4PQ58FG1 418 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms