RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 CSF2RAP15509 400 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 ZNF365Q70YC5 407 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 RNF180Q86T96 592 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 FEZ1Q99689 392 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 MOV10L1Q9BXT6 1211 aaKnown RBP9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 SIL1Q9H173 461 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 DHX36Q9H2U1 1008 aaKnown RBP9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 SLC24A3Q9HC58 644 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 CEP126Q9P2H0 1117 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 ZNF521Q96K83 1311 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 PI4K2BG5E9Z4 385 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 SMIM22K7EJ46 135 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 STRNO43815 780 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 ADAMTS4O75173 837 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 LDHCP07864 332 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 GSTO1P78417 241 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 NHLH1Q02575 133 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 PPP2R2DQ66LE6 453 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 CRACR2BQ8N4Y2 399 aaPredicted RBP9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 LENG1Q96BZ8 264 aaPredicted RBP9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 MAML3Q96JK9 1138 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.9
NPIPB4-215ENST00000542133 SMCHD1A6NHR9 2005 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 FLT1P17948 1338 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 GH2P01242 217 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 ERCC3P19447 782 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 ACLYP53396 1101 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 USP14P54578 494 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 MAPKAPK5Q8IW41 473 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 TMEM199Q8N511 208 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 SHCBP1Q8NEM2 672 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 KIAA1683Q9H0B3 1180 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 RPAP3Q9H6T3 665 aaPredicted RBP9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 COG5Q9UP83 839 aa9.39□□□□□ -0.91
NPIPB4-215ENST00000542133 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 MROH7Q68CQ1 1323 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 IL15P40933 162 aaPredicted RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 ABRAQ8N0Z2 381 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 NUP133Q8WUM0 1156 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 TSEN34Q9BSV6 310 aaKnown RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 PPP1R12CQ9BZL4 782 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 SPATC1LQ9H0A9 340 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 MTIF3Q9H2K0 278 aaKnown RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 CD320Q9NPF0 282 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 IL23AQ9NPF7 189 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 HMG20BQ9P0W2 317 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 MTCH2Q9Y6C9 303 aa9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 COL4A4P53420 1690 aaPredicted RBP9.38□□□□□ -0.91
NPIPB4-215ENST00000542133 BRWD1Q9NSI6 2320 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 AKR1A1P14550 325 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 MYOGP15173 224 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 RABGGTBP53611 331 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 TBC1D9Q6ZT07 1266 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 SPNS2Q8IVW8 549 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 ACER1Q8TDN7 264 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 AATFQ9NY61 560 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 RAI14Q9P0K7 980 aa9.37□□□□□ -0.91
NPIPB4-215ENST00000542133 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 A0A1B0GUL7 405 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 RFXAPO00287 272 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 HLA-DOAP06340 250 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 ZNF865P0CJ78 1059 aaPredicted RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 CDK7P50613 346 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 TIMM10P62072 90 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 DDX10Q13206 875 aaKnown RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 MVPQ14764 893 aaKnown RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 GORABQ5T7V8 394 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 CCSAPQ6IQ19 270 aaPredicted RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 FAM126BQ8IXS8 530 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 SPATA5Q8NB90 893 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 KLHDC9Q8NEP7 349 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 HLA-CQ95604 372 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 NOL10Q9BSC4 688 aaKnown RBP9.36□□□□□ -0.91
NPIPB4-215ENST00000542133 TINF2Q9BSI4 451 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms