RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 NBPF12Q5TAG4 269 aaPredicted RBP9.97□□□□□ -0.81
THBS3-210ENST00000541576 KCTD1Q719H9 257 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 RTEL1Q9NZ71 1219 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 A0A1W2PRG0 241 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 NPY5RQ15761 445 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 DCAF15Q66K64 600 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 PIGSQ96S52 555 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 GOLGA6L4A6NEF3 574 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 OFD1O75665 1012 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 NDUFB10O96000 172 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 CALML3P27482 149 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 ZSCAN23Q3MJ62 389 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 WWC2Q6AWC2 1192 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 TTBK2Q6IQ55 1244 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 GMCL1Q96IK5 515 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 BARHL2Q9NY43 387 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 PPP2R3BQ9Y5P8 575 aa9.97□□□□□ -0.81
THBS3-210ENST00000541576 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.81
THBS3-210ENST00000541576 ECE1P42892 770 aa9.96□□□□□ -0.81
THBS3-210ENST00000541576 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.81
THBS3-210ENST00000541576 ACER1Q8TDN7 264 aa9.96□□□□□ -0.81
THBS3-210ENST00000541576 TMX2Q9Y320 296 aa9.96□□□□□ -0.81
THBS3-210ENST00000541576 PITPNM2Q9BZ72 1349 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 LIG1P18858 919 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 SLC16A2P36021 539 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 TOB1P50616 345 aaPredicted RBP9.96□□□□□ -0.82
THBS3-210ENST00000541576 STK38Q15208 465 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 PRAMEF18Q5VWM3 479 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 ANO1Q5XXA6 986 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 TYW1BQ6NUM6 668 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 FAM177A1Q8N128 213 aaPredicted RBP9.96□□□□□ -0.82
THBS3-210ENST00000541576 C17orf53Q8N3J3 647 aaPredicted RBP9.96□□□□□ -0.82
THBS3-210ENST00000541576 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
THBS3-210ENST00000541576 RBSNQ9H1K0 784 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 SH2D4AQ9H788 454 aa9.96□□□□□ -0.82
THBS3-210ENST00000541576 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.96□□□□□ -0.82
THBS3-210ENST00000541576 FAM205CA6NFA0 338 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 STXBP3O00186 592 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 CTNND1O60716 968 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 YEATS4O95619 227 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 NOM1Q5C9Z4 860 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 RILPL1Q5EBL4 403 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 EARS2Q5JPH6 523 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 CCDC12Q8WUD4 166 aaPredicted RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 ZNF341Q9BYN7 854 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 JMJD4Q9H9V9 463 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 GOPCQ9HD26 462 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 GINM1Q9NU53 330 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 SYCE3A1L190 88 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 BMP3P12645 472 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 NAPAP54920 295 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 NUP88Q99567 741 aaPredicted RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 PCDHA4Q9UN74 947 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 hCG_1984214I3L0E3 225 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 SF3A1Q15459 793 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 GALNT17Q6IS24 598 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 SPICE1Q8N0Z3 855 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 ZNF713Q8N859 430 aaPredicted RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 KCNG4Q8TDN1 519 aa9.95□□□□□ -0.82
THBS3-210ENST00000541576 DCPSQ96C86 337 aaKnown RBP9.95□□□□□ -0.82
THBS3-210ENST00000541576 PNMA6FA0A0J9YX94 578 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 USP17L10C9JJH3 530 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 ME1P48163 572 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
THBS3-210ENST00000541576 TNFRSF25Q93038 417 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 PCDHA7Q9UN72 937 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 ATAD5Q96QE3 1844 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 GLTPD2A6NH11 291 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 TMEM232C9JQI7 657 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 ZBTB5O15062 677 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 SPTLC2O15270 562 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 INPP5BP32019 993 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 IKQ13123 557 aaPredicted RBP9.94□□□□□ -0.82
THBS3-210ENST00000541576 PTPAQ15257 358 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 SUPT20HL1Q3ZLR7 823 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 SULF1Q8IWU6 871 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 BICD2Q8TD16 824 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 SYAP1Q96A49 352 aaPredicted RBP9.94□□□□□ -0.82
THBS3-210ENST00000541576 FEZ1Q99689 392 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 GLIS2Q9BZE0 524 aaPredicted RBP9.94□□□□□ -0.82
THBS3-210ENST00000541576 VCPKMTQ9H867 229 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 EPHX2P34913 555 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 ZNF445P59923 1031 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 SLC39A14Q15043 492 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 DAGLBQ8NCG7 672 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 MTMR8Q96EF0 704 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 WRNIP1Q96S55 665 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 ZMYND12Q9H0C1 365 aa9.94□□□□□ -0.82
THBS3-210ENST00000541576 C6orf50Q9HD87 102 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms