RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LRRC8CQ8TDW0 803 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 TUBB6Q9BUF5 446 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 TXLNGQ9NUQ3 528 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 TPX2Q9ULW0 747 aaKnown RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 EXOC3O60645 756 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ZWINTO95229 277 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ERCC3P19447 782 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 EAF2Q96CJ1 260 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 PPP1R9AQ9ULJ8 1098 aa16.44■□□□□ 0.22
SMARCA4-207ENST00000541122 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 THAP12O43422 761 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 NR1D1P20393 614 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 EIF3BP55884 814 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 B4DLN1 442 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 EIF4A1P60842 406 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 E2F5Q15329 346 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 ADCK5Q3MIX3 580 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 NELFCDQ8IXH7 590 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 FBXO41Q8TF61 875 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 DDX27Q96GQ7 796 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 MED23Q9ULK4 1368 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 PDE8AO60658 829 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 DKC1O60832 514 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 N4BP1O75113 896 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 MYL1P05976 194 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 RPSAP08865 295 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 ZAP70P43403 619 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 TRAPPC10P48553 1259 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 REXO1Q8N1G1 1221 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 CFAP61Q8NHU2 1237 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 TCP11Q8WWU5 503 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 KLHL29Q96CT2 875 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 EIF3CLB5ME19 914 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 PPP4R1Q8TF05 950 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 CCT6BQ92526 530 aa16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 EIF3CQ99613 913 aaKnown RBP16.43■□□□□ 0.22
SMARCA4-207ENST00000541122 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 RESTQ13127 1097 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 CCDC89Q8N998 374 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 FANCBQ8NB91 859 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PLEKHF1Q96S99 279 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 TUBGCP2Q9BSJ2 902 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 SCOCQ9UIL1 159 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PLEKHA4Q9H4M7 779 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 ARMCX3Q9UH62 379 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 ARHGAP42A6NI28 874 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 HSPA6P17066 643 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 ADCY8P40145 1251 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■■■ 28.1
SMARCA4-207ENST00000541122 DCUN1D2Q6PH85 259 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 SPATA5Q8NB90 893 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 PBKQ96KB5 322 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 FAF1Q9UNN5 650 aaPredicted RBP16.42■□□□□ 0.22
SMARCA4-207ENST00000541122 ENC1O14682 589 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 KIF1CO43896 1103 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 E2F4Q16254 413 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 GCNT3O95395 438 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 SKIP12755 728 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 PPARDQ03181 441 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 MYOM2P54296 1465 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 LAD1O00515 517 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 SEMA3EO15041 775 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 SEPT2Q15019 361 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 MIER3Q7Z3K6 550 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 VTI1AQ96AJ9 217 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 CNOT6LQ96LI5 555 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 NEURL1BA8MQ27 555 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 PGRMC1O00264 195 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 ATF2P15336 505 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 EHHADHQ08426 723 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 ARHGEF18Q6ZSZ5 1173 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 PALM2Q8IXS6 379 aa16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms