RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CYP2C19P33261 490 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 UBE2Q1Q7Z7E8 422 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 REPS2Q8NFH8 660 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 PAWRQ96IZ0 340 aaKnown RBP16.79■□□□□ 0.28
LTBR-209ENST00000541102 MMP19Q99542 508 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 DSCC1Q9BVC3 393 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 LSG1Q9H089 658 aaKnown RBP16.79■□□□□ 0.28
LTBR-209ENST00000541102 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 FEM1BQ9UK73 627 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 ZNF214Q9UL59 606 aaPredicted RBP16.79■□□□□ 0.28
LTBR-209ENST00000541102 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
LTBR-209ENST00000541102 ZMYM6O95789 1325 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 CAPN2P17655 700 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 CNGA1P29973 690 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 SLC1A4P43007 532 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
LTBR-209ENST00000541102 KCTD2Q14681 263 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 SNRNP48Q6IEG0 339 aaKnown RBP16.78■□□□□ 0.28
LTBR-209ENST00000541102 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 HTATIP2Q9BUP3 242 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
LTBR-209ENST00000541102 PARP14Q460N5 1801 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 ZNF213O14771 459 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 PGK2P07205 417 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 AKNAD1Q5T1N1 836 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 KCTD1Q719H9 257 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 ABRAQ8N0Z2 381 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 DIS3LQ8TF46 1054 aaKnown RBP16.77■□□□□ 0.28
LTBR-209ENST00000541102 TEX13BQ9BXU2 312 aa16.77■□□□□ 0.28
LTBR-209ENST00000541102 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
LTBR-209ENST00000541102 COL11A1P12107 1806 aaPredicted RBP16.76■□□□□ 0.27
LTBR-209ENST00000541102 COPB2P35606 906 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 RCSD1Q6JBY9 416 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 NECAB2Q7Z6G3 386 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
LTBR-209ENST00000541102 OGDHLQ9ULD0 1010 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 CEP290O15078 2479 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 BRCA2P51587 3418 aa16.76■□□□□ 0.27
LTBR-209ENST00000541102 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 H0YGN5 161 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 CCDC96Q2M329 555 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 PRAMEF19Q5SWL8 479 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 OLFML2BQ68BL8 750 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 ANKLE1Q8NAG6 615 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 TRPV1Q8NER1 839 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 MAP4K1Q92918 833 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 SLC38A10Q9HBR0 1119 aa16.75■□□□□ 0.27
LTBR-209ENST00000541102 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
LTBR-209ENST00000541102 TOP1P11387 765 aaKnown RBP16.74■□□□□ 0.27
LTBR-209ENST00000541102 STAT2P52630 851 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 SNAP25P60880 206 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 LHX8Q68G74 356 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 MAML3Q96JK9 1138 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 CTNNA3Q9UI47 895 aa16.74■□□□□ 0.27
LTBR-209ENST00000541102 ZNFX1Q9P2E3 1918 aaKnown RBP16.73■□□□□ 0.27
LTBR-209ENST00000541102 ATP2A1O14983 1001 aa16.73■□□□□ 0.27
LTBR-209ENST00000541102 PCP11498 1178 aaKnown RBP16.73■□□□□ 0.27
LTBR-209ENST00000541102 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
LTBR-209ENST00000541102 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
LTBR-209ENST00000541102 ESR2Q92731 530 aa16.73■□□□□ 0.27
LTBR-209ENST00000541102 ZKSCAN3Q9BRR0 538 aa16.73■□□□□ 0.27
LTBR-209ENST00000541102 HOMER2Q9NSB8 354 aa16.73■□□□□ 0.27
LTBR-209ENST00000541102 DDX20Q9UHI6 824 aaKnown RBP16.73■□□□□ 0.27
LTBR-209ENST00000541102 NEDD4P46934 1319 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
LTBR-209ENST00000541102 KDM4AO75164 1064 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 SEC24BO95487 1268 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 IGHA2P01877 340 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 CYP21A2P08686 494 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 FDX1P10109 184 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 CYBAP13498 195 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 NOVP48745 357 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
LTBR-209ENST00000541102 ZNF792Q3KQV3 632 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 ANO1Q5XXA6 986 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 CCDC174Q6PII3 467 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 ANKRD35Q8N283 1001 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 DCAF4Q8WV16 495 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 GPCPD1Q9NPB8 672 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 NR2E3Q9Y5X4 410 aa16.72■□□□□ 0.27
LTBR-209ENST00000541102 FRMPD2Q68DX3 1309 aaPredicted RBP16.71■□□□□ 0.27
LTBR-209ENST00000541102 EVI5O60447 810 aa16.71■□□□□ 0.27
LTBR-209ENST00000541102 PLA2G6O60733 806 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms