RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 RASSF4Q9H2L5 321 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 COL1A1P02452 1464 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 CNTNAP5Q8WYK1 1306 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 ZPR1O75312 459 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 SYF2O95926 243 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 ELOA2Q8IYF1 753 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 STAG2Q8N3U4 1231 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 LIMA1Q9UHB6 759 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 MYH3P11055 1940 aa11.66□□□□□ -0.54
CDC42SE1-207ENST00000540998 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 ERLIN1O75477 346 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 SLC7A5Q01650 507 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 HSP90B2PQ58FF3 399 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 IQUBQ8NA54 791 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 RRP36Q96EU6 259 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 UIMC1Q96RL1 719 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 CARD10Q9BWT7 1032 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 MYH10P35580 1976 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 STAT6P42226 847 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 NAALADL2Q58DX5 795 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 HNRNPLLQ8WVV9 542 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 RIOK1Q9BRS2 568 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-207ENST00000540998 RASSF10A6NK89 507 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 XBP1P17861 261 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 GGCXP38435 758 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 KIAA1328Q86T90 577 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 CAGE1Q8TC20 777 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 TRIM47Q96LD4 638 aa11.65□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 FAM170AA1A519 330 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 CTR9Q6PD62 1173 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 TRAPPC11Q7Z392 1133 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 FERMT2Q96AC1 680 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 BTG4Q9NY30 223 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 RWDD2AQ9UIY3 292 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 SHANK3Q9BYB0 1731 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 PNPLA7Q6ZV29 1317 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 FCER1AP12319 257 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 JAKMIP2Q96AA8 810 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 MLXIPQ9HAP2 919 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 NUP98P52948 1817 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 PARP4Q9UKK3 1724 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-207ENST00000540998 EPHB6O15197 1021 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 INF2Q27J81 1249 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZNF658Q5TYW1 1059 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 PAPPAQ13219 1627 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZNF263O14978 683 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 NCK2O43639 380 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 USP14P54578 494 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 EIF5P55010 431 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 PACS2Q86VP3 889 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC148Q8NFR7 591 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 OR8K1Q8NGG5 319 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 COG1Q8WTW3 980 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 DYNLL2Q96FJ2 89 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 HPCAL4Q9UM19 191 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 NID2Q14112 1375 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 SCG2P13521 617 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 TRIM21P19474 475 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 SLC35G1Q2M3R5 365 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 IQCA1Q86XH1 822 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
CDC42SE1-207ENST00000540998 ITIH6Q6UXX5 1313 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 EIF3CLB5ME19 914 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 GNAT2P19087 354 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 FECHP22830 423 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 PRDX5P30044 214 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 TMC4Q7Z404 712 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 SLC44A5Q8NCS7 719 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 CTCFLQ8NI51 663 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 EIF3CQ99613 913 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 BRMS1Q9HCU9 246 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms