RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 APOBEC3HQ6NTF7 200 aaKnown RBP10.86□□□□□ -0.67
LCOR-209ENST00000540664 USP17L2Q6R6M4 530 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 HEATR3Q7Z4Q2 680 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 PODNQ7Z5L7 613 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 VSTM4Q8IW00 320 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 RASGRP4Q8TDF6 673 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 CCDC12Q8WUD4 166 aaPredicted RBP10.86□□□□□ -0.67
LCOR-209ENST00000540664 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
LCOR-209ENST00000540664 CCDC194A0A1B0GVG4 234 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 ESYT2A0FGR8 921 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 hCG_1984214I3L0E3 225 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 LAD1O00515 517 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 PDHBP11177 359 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 PRPHP41219 470 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 CUL4BQ13620 913 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 STYK1Q6J9G0 422 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 ZNF713Q8N859 430 aaPredicted RBP10.85□□□□□ -0.67
LCOR-209ENST00000540664 MXD3Q9BW11 206 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 USP40Q9NVE5 1235 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 INTS13Q9NVM9 706 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 STK32BQ9NY57 414 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 SIPA1L1O43166 1804 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 AKR1B1P15121 316 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 SHMT1P34896 483 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 PICALMQ13492 652 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 C2CD5Q86YS7 1000 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 ZNF622Q969S3 477 aaKnown RBP eCLIP10.85□□□□□ -0.67
LCOR-209ENST00000540664 TEKT1Q969V4 418 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 RRP36Q96EU6 259 aaKnown RBP10.85□□□□□ -0.67
LCOR-209ENST00000540664 MTRQ99707 1265 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 EHD4Q9H223 541 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 CPVLQ9H3G5 476 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 SERPINB13Q9UIV8 391 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 NFE2L3Q9Y4A8 694 aa10.85□□□□□ -0.67
LCOR-209ENST00000540664 F8W031 263 aaPredicted RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 SERPINC1P01008 464 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 AFMP43652 599 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 ASPRV1Q53RT3 343 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 KRT25Q7Z3Z0 450 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 ZDHHC15Q96MV8 337 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 TMEM60Q9H2L4 133 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 SLX4Q8IY92 1834 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 SCN9AQ15858 1988 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 GTPBP6O43824 516 aaPredicted RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 GNA11P29992 359 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 NAPAP54920 295 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 HDLBPQ00341 1268 aaKnown RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 TBX2Q13207 712 aaPredicted RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 ORC2Q13416 577 aaPredicted RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 INF2Q27J81 1249 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 CCAR2Q8N163 923 aaKnown RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 PIGSQ96S52 555 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
LCOR-209ENST00000540664 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 C6orf50Q9HD87 102 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 MTMR7Q9Y216 660 aa10.84□□□□□ -0.67
LCOR-209ENST00000540664 SMCO2A6NFE2 343 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
LCOR-209ENST00000540664 SFPQP23246 707 aaKnown RBP eCLIP10.83□□□□□ -0.689e-9■□□□□ 9
LCOR-209ENST00000540664 CASP1P29466 404 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 CRKP46108 304 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 SCNN1DP51172 638 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 CFAP100Q494V2 611 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 STRIP1Q5VSL9 837 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 SPATA1Q5VX52 437 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 DTHD1Q6ZMT9 781 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 APTXQ7Z2E3 356 aaKnown RBP10.83□□□□□ -0.68
LCOR-209ENST00000540664 CCSER1Q9C0I3 900 aa10.83□□□□□ -0.68
LCOR-209ENST00000540664 TMEM232C9JQI7 657 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 H0YIN7 160 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 TTLL1O95922 423 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 NONOQ15233 471 aaKnown RBP eCLIP10.82□□□□□ -0.68
LCOR-209ENST00000540664 TPD52L1Q16890 204 aaPredicted RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 CDKAL1Q5VV42 579 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 TRMT44Q8IYL2 757 aaKnown RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 C7orf43Q8WVR3 580 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 DISC1Q9NRI5 854 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 SEC63Q9UGP8 760 aaKnown RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 A0A1B0GTH6 734 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 TNNT1P13805 278 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 TXLNAP40222 546 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 ZNF543Q08ER8 600 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 NFIAQ12857 509 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 NR1I3Q14994 352 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 E4F1Q66K89 784 aaPredicted RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 C16orf45Q96MC5 204 aaPredicted RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 IDI2Q9BXS1 227 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 DBNDD1Q9H9R9 158 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms