RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 MED1Q15648 1581 aaPredicted RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 TRAF5O00463 557 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 WNT7AO00755 349 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 AMPD3Q01432 767 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 UBE2SQ16763 222 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 DNAJC21Q5F1R6 531 aaKnown RBP11.1□□□□□ -0.63
PHC1-208ENST00000540574 FEZ1Q99689 392 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 MXD3Q9BW11 206 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 KANSL2Q9H9L4 492 aa11.1□□□□□ -0.63
PHC1-208ENST00000540574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
PHC1-208ENST00000540574 TRIM37O94972 964 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 CLCN6P51797 869 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 TMEM260Q9NX78 707 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
PHC1-208ENST00000540574 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
PHC1-208ENST00000540574 CHMP2AO43633 222 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 TFRCP02786 760 aaKnown RBP11.09□□□□□ -0.63
PHC1-208ENST00000540574 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
PHC1-208ENST00000540574 KRT31Q15323 416 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 TMEM47Q9BQJ4 181 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 SLURP2P0DP57 97 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 BMP6P22004 513 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 NOP2P46087 812 aaKnown RBP11.09□□□□□ -0.63
PHC1-208ENST00000540574 DBNDD1Q9H9R9 158 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 USP40Q9NVE5 1235 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 VPS18Q9P253 973 aa11.09□□□□□ -0.63
PHC1-208ENST00000540574 DDAH1O94760 285 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 PRCPP42785 496 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 TROAPQ12815 778 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 SV2BQ7L1I2 683 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 MAEAQ7L5Y9 396 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 SPICE1Q8N0Z3 855 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 A0A087X0B3 334 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 STX10O60499 249 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 CALCRLQ16602 461 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 GSDMAQ96QA5 445 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 PLCG1P19174 1290 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 SYCP1Q15431 976 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 PNPLA7Q6ZV29 1317 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 TSG101Q99816 390 aa11.08□□□□□ -0.64
PHC1-208ENST00000540574 RIOK1Q9BRS2 568 aaKnown RBP11.08□□□□□ -0.64
PHC1-208ENST00000540574 SPATA31A1Q5TZJ5 1347 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 POTEMA6NI47 508 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
PHC1-208ENST00000540574 SERPINB2P05120 415 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CDK8P49336 464 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 C2CD5Q86YS7 1000 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 BRIP1Q9BX63 1249 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 TMEM60Q9H2L4 133 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 PCDHA4Q9UN74 947 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 WDR19Q8NEZ3 1342 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 A0A0U1RQJ8 604 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CYLC1P35663 651 aaPredicted RBP11.07□□□□□ -0.64
PHC1-208ENST00000540574 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
PHC1-208ENST00000540574 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 ZBTB21Q9ULJ3 1066 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CCDC66A2RUB6 948 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 SRGAP2O75044 1071 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 OR52Z1P0C646 297 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CYP4A11Q02928 519 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 GRIK5Q16478 980 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
PHC1-208ENST00000540574 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CYP26C1Q6V0L0 522 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 NEK11Q8NG66 645 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 CEP95Q96GE4 821 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 NAPGQ99747 312 aaPredicted RBP11.07□□□□□ -0.64
PHC1-208ENST00000540574 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
PHC1-208ENST00000540574 VEZTQ9HBM0 779 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
PHC1-208ENST00000540574 STK36Q9NRP7 1315 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 TMCO5BA8MYB1 307 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
PHC1-208ENST00000540574 TRIML1Q8N9V2 468 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 CHP1Q99653 195 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 TRIM10Q9UDY6 481 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 BCL9O00512 1426 aa11.06□□□□□ -0.64
PHC1-208ENST00000540574 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms