RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 UBA5Q9GZZ9 404 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 ZMYND12Q9H0C1 365 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 PCDHA5Q9Y5H7 936 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
TSFM-207ENST00000540550 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 ARL6IP4Q66PJ3 421 aaKnown RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 KRT25Q7Z3Z0 450 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 SMARCE1Q969G3 411 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 EPSTI1Q96J88 318 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 PSMD1Q99460 953 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 SMCO2A6NFE2 343 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 DDTLA6NHG4 134 aaPredicted RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 FOXN1O15353 648 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 DPEP1P16444 411 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 CCDC96Q2M329 555 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 LARGE2Q8N3Y3 721 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 MRFAP1L1Q96HT8 127 aa16.92■□□□□ 0.3
TSFM-207ENST00000540550 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
TSFM-207ENST00000540550 SMC2O95347 1197 aa16.91■□□□□ 0.3
TSFM-207ENST00000540550 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
TSFM-207ENST00000540550 INF2Q27J81 1249 aa16.91■□□□□ 0.3
TSFM-207ENST00000540550 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
TSFM-207ENST00000540550 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
TSFM-207ENST00000540550 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
TSFM-207ENST00000540550 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
TSFM-207ENST00000540550 IKBKBO14920 756 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 ENTPD3O75355 529 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 SLFN14P0C7P3 912 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
TSFM-207ENST00000540550 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
TSFM-207ENST00000540550 DNAJC18Q9H819 358 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 DACH1Q9UI36 760 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 ESYT2A0FGR8 921 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
TSFM-207ENST00000540550 TXLNAP40222 546 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
TSFM-207ENST00000540550 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
TSFM-207ENST00000540550 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
TSFM-207ENST00000540550 PTGS1P23219 599 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
TSFM-207ENST00000540550 KANSL2Q9H9L4 492 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
TSFM-207ENST00000540550 ARFGEF1Q9Y6D6 1849 aa16.89■□□□□ 0.29
TSFM-207ENST00000540550 ATRNL1Q5VV63 1379 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 A0A087X0B3 334 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 LAD1O00515 517 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 ADCY7P51828 1080 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 MYL5Q02045 173 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 IQUBQ8NA54 791 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 RAD21O60216 631 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 RAD17O75943 681 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 SLURP2P0DP57 97 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 TATDN1Q6P1N9 297 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 DTHD1Q6ZMT9 781 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 TMEM179Q6ZVK1 233 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 CCDC186Q7Z3E2 898 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 PRMT6Q96LA8 375 aaPredicted RBP16.88■□□□□ 0.29
TSFM-207ENST00000540550 VPS33BQ9H267 617 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 NYAP2Q9P242 653 aa16.88■□□□□ 0.29
TSFM-207ENST00000540550 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 PSMD14O00487 310 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
TSFM-207ENST00000540550 KCNA3P22001 575 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 AFMP43652 599 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 SARSP49591 514 aaKnown RBP16.87■□□□□ 0.29
TSFM-207ENST00000540550 NCAPHQ15003 741 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 IL17AQ16552 155 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
TSFM-207ENST00000540550 NIM1KQ8IY84 436 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 ADGRF4Q8IZF3 695 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 DCAF4Q8WV16 495 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 PAGE5Q96GU1 130 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
TSFM-207ENST00000540550 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
TSFM-207ENST00000540550 ICA1Q05084 483 aa16.86■□□□□ 0.29
TSFM-207ENST00000540550 MORC3Q14149 939 aa16.86■□□□□ 0.29
TSFM-207ENST00000540550 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
TSFM-207ENST00000540550 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
TSFM-207ENST00000540550 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
TSFM-207ENST00000540550 COA7Q96BR5 231 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms