RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 ZNF280CQ8ND82 737 aa13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 NKX2-3Q8TAU0 364 aa13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 FAM217BQ9NTX9 383 aaPredicted RBP13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 RBM28Q9NW13 759 aaKnown RBP13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 RTEL1Q9NZ71 1219 aa13.79□□□□□ -0.2
CYB561A3-215ENST00000540317 LAMB1P07942 1786 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 TNKSO95271 1327 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 RANBP6O60518 1105 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 FOSBP53539 338 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 UVSSAQ2YD98 709 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 CATIPQ7Z7H3 387 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 RBSNQ9H1K0 784 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 ZNF287Q9HBT7 754 aa13.78□□□□□ -0.2
CYB561A3-215ENST00000540317 DDAH1O94760 285 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 DEXIO95424 95 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 YEATS4O95619 227 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 ASNSP08243 561 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 GUCY1B3Q02153 619 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 METTL16Q86W50 562 aaKnown RBP13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 BICD2Q8TD16 824 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
CYB561A3-215ENST00000540317 GDF11O95390 407 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 PSMC4P43686 418 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 HMGCS2P54868 508 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 SAFBQ15424 915 aaKnown RBP eCLIP13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 KCNG4Q8TDN1 519 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 AGTPBP1Q9UPW5 1226 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 ROBO3Q96MS0 1386 aa13.76□□□□□ -0.21
CYB561A3-215ENST00000540317 XBP1P17861 261 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 RXRAP19793 462 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 JAG1P78504 1218 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 KRT40Q6A162 431 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 PGBD1Q96JS3 809 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 MYL10Q9BUA6 226 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 PTCH2Q9Y6C5 1203 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 CYP2D7A0A087X1C5 515 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 CTAGE5O15320 804 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 GNRH1P01148 92 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 CCDC192P0DO97 292 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 SLC9C1Q4G0N8 1177 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 NBPF11Q86T75 865 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 PROCA1Q8NCQ7 364 aaPredicted RBP13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 PHKBQ93100 1093 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CYB561A3-215ENST00000540317 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 LIG1P18858 919 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 HOXD10P28358 340 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 ME1P48163 572 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 PLCD1P51178 756 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.215e-23■■■■■ 40.6
CYB561A3-215ENST00000540317 MTMR2Q13614 643 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 SHROOM1Q2M3G4 852 aaPredicted RBP13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 DGKHQ86XP1 1220 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 ANKS1AQ92625 1134 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 TRIM47Q96LD4 638 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 MAP3K14Q99558 947 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 WDR18Q9BV38 432 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 TNMDQ9H2S6 317 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 GINM1Q9NU53 330 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 TMOD4Q9NZQ9 345 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 PNMA3Q9UL41 463 aa13.74□□□□□ -0.21
CYB561A3-215ENST00000540317 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms