RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FGAP02671 866 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 RUBCNQ92622 972 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 TSC22D3Q99576 134 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 PSD3Q9NYI0 1048 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 CTAGE9A4FU28 777 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 IDH1O75874 414 aaKnown RBP6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 CYLC1P35663 651 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ST3GAL1Q11201 340 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 SCRN1Q12765 414 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 TRIM22Q8IYM9 498 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 C8orf76Q96K31 380 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 MYO1AQ9UBC5 1043 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 DAAM1Q9Y4D1 1078 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 GOLGA8BA8MQT2 603 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ZPR1O75312 459 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 CPA1P15085 419 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ACTN3Q08043 901 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-214ENST00000540109 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 TMEM132AQ24JP5 1023 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ZNF569Q5MCW4 686 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 MAP3K21Q5TCX8 1036 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 TPTE2Q6XPS3 522 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 LRRC45Q96CN5 670 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 NUP88Q99567 741 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-214ENST00000540109 SELENOSQ9BQE4 189 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ANAPC4Q9UJX5 808 aa6.74□□□□□ -1.33
PTPRD-214ENST00000540109 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 GSTO1P78417 241 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CCDC92Q53HC0 331 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CCDC170Q8IYT3 715 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 RABGGTAQ92696 567 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 NLRP3Q96P20 1036 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 STRBPQ96SI9 672 aaKnown RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 EIF4E1BA6NMX2 242 aaKnown RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 GOLGA8KD6RF30 607 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 UBASH3AP57075 661 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 STOX1Q6ZVD7 989 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 BRIP1Q9BX63 1249 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 RMI1Q9H9A7 625 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 POLR3EQ9NVU0 708 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 RTEL1Q9NZ71 1219 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 SAMD15Q9P1V8 674 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 STK38LQ9Y2H1 464 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 AKAP11Q9UKA4 1901 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 hCG_2014768A0A024R1R8 64 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 KLF18A0A0U1RQI7 1052 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CREB3O43889 395 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CLCN6P51797 869 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 PPP1R7Q15435 360 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 SRLQ86TD4 932 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 FAM204AQ9H8W3 233 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 SH2B2O14492 632 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 GNPTABQ3T906 1256 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 MFSD6Q6ZSS7 791 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 AMOTL1Q8IY63 956 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 TSGA10Q9BZW7 698 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 ZCCHC17Q9NP64 241 aaKnown RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 TCRBV5S4A2TA0A5A2 114 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 TTC36A6NLP5 189 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 E7EVH7 732 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 MARCH6O60337 910 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 GADD45BO75293 160 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 METAP2P50579 478 aaKnown RBP eCLIP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 SETDB1Q15047 1291 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-214ENST00000540109 FSIP1Q8NA03 581 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 SETDB2Q96T68 719 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 LRRC27Q9C0I9 530 aa6.73□□□□□ -1.33
PTPRD-214ENST00000540109 CLTAP09496 248 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 ZNF75DP51815 510 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 WDR78Q5VTH9 848 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 VPS37DQ86XT2 251 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 RTCBQ9Y3I0 505 aaKnown RBP6.72□□□□□ -1.33
PTPRD-214ENST00000540109 CCDC151A5D8V7 595 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 ARHGAP6O43182 974 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 ZBTB43O43298 467 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 RAD21O60216 631 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 EPS15P42566 896 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 ZFYVE27Q5T4F4 411 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 ESR2Q92731 530 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 SPATA17Q96L03 361 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 LRP2BPQ9P2M1 347 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 MYH15Q9Y2K3 1946 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 NOL3O60936 208 aaKnown RBP6.72□□□□□ -1.33
PTPRD-214ENST00000540109 PNMA6AP0CW24 399 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-214ENST00000540109 DESP17661 470 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 PHKA1P46020 1223 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 KCNJ6P48051 423 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 RWDD2BP57060 319 aa6.72□□□□□ -1.33
PTPRD-214ENST00000540109 RNASELQ05823 741 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms