RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 TMX2Q9Y320 296 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 DDX49Q9Y6V7 483 aaKnown RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 SSC5DA1L4H1 1573 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 GREB1LQ9C091 1923 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 TMEM232C9JQI7 657 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 ADAMTS3O15072 1205 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 BMP3P12645 472 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 KRT2P35908 639 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 IKQ13123 557 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 NPY5RQ15761 445 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 SUPT20HL1Q3ZLR7 823 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 KRT26Q7Z3Y9 468 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 GPT2Q8TD30 523 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 SCAND2PQ9GZW5 306 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 GZF1Q9H116 711 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 FOXP1Q9H334 677 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 TAF1DQ9H5J8 278 aaPredicted RBP7.95□□□□□ -1.14
CDH19-203ENST00000540086 GOPCQ9HD26 462 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 BARHL2Q9NY43 387 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 ZNF112Q9UJU3 913 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 CFAP45Q9UL16 551 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 CLIC4Q9Y696 253 aa7.95□□□□□ -1.14
CDH19-203ENST00000540086 DICER1Q9UPY3 1922 aaKnown RBP7.94□□□□□ -1.14
CDH19-203ENST00000540086 POTECB2RU33 542 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 NAPAP54920 295 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SNAP25P60880 206 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SKOR2Q2VWA4 1001 aaPredicted RBP7.94□□□□□ -1.14
CDH19-203ENST00000540086 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
CDH19-203ENST00000540086 EARS2Q5JPH6 523 aaKnown RBP7.94□□□□□ -1.14
CDH19-203ENST00000540086 FAM83BQ5T0W9 1011 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SCYL3Q8IZE3 742 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 FEZ1Q99689 392 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 VCPKMTQ9H867 229 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 BRMS1Q9HCU9 246 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SH3GLB2Q9NR46 395 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 SYNPO2Q9UMS6 1093 aa7.94□□□□□ -1.14
CDH19-203ENST00000540086 IQCA1LA6NCM1 817 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 PPP1R11O60927 126 aaPredicted RBP7.93□□□□□ -1.14
CDH19-203ENST00000540086 ATP2B1P20020 1258 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 DGKZQ13574 1117 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 KLHL40Q2TBA0 621 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 ATL3Q6DD88 541 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 CCDC148Q8NFR7 591 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 RASGRP4Q8TDF6 673 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 COA7Q96BR5 231 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 PICK1Q9NRD5 415 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 RTEL1Q9NZ71 1219 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 PNMA6FA0A0J9YX94 578 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 ZBTB5O15062 677 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 USP2O75604 605 aaPredicted RBP7.93□□□□□ -1.14
CDH19-203ENST00000540086 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 POTEJP0CG39 1038 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 PTPRAP18433 802 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 CALML3P27482 149 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 UBE2HP62256 183 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 MTMR2Q13614 643 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 CDC37Q16543 378 aaPredicted RBP7.93□□□□□ -1.14
CDH19-203ENST00000540086 QRICH1Q2TAL8 776 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 SYDE2Q5VT97 1194 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 ANO1Q5XXA6 986 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 BLIDQ8IZY5 108 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 ZC3H15Q8WU90 426 aaKnown RBP7.93□□□□□ -1.14
CDH19-203ENST00000540086 TNFRSF25Q93038 417 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 CDCA5Q96FF9 252 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 RCOR1Q9UKL0 485 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 PCDHA4Q9UN74 947 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 ELP1O95163 1332 aa7.93□□□□□ -1.14
CDH19-203ENST00000540086 SMCO2A6NFE2 343 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 MBD3O95983 291 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 NASPP49321 788 aaPredicted RBP7.92□□□□□ -1.14
CDH19-203ENST00000540086 TOB1P50616 345 aaPredicted RBP7.92□□□□□ -1.14
CDH19-203ENST00000540086 STAT2P52630 851 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 STK38Q15208 465 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 SF3A1Q15459 793 aaKnown RBP7.92□□□□□ -1.14
CDH19-203ENST00000540086 CAVIN1Q6NZI2 390 aaKnown RBP7.92□□□□□ -1.14
CDH19-203ENST00000540086 PIK3AP1Q6ZUJ8 805 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 LINC00301Q8NCQ3 95 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.92□□□□□ -1.14
CDH19-203ENST00000540086 CCDC12Q8WUD4 166 aaPredicted RBP7.92□□□□□ -1.14
CDH19-203ENST00000540086 SPOCK2Q92563 424 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 KIFC2Q96AC6 838 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 PGBD1Q96JS3 809 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 ZMYND12Q9H0C1 365 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 CLEC11AQ9Y240 323 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 ZHX2Q9Y6X8 837 aa7.92□□□□□ -1.14
CDH19-203ENST00000540086 GOLGA6L4A6NEF3 574 aa7.91□□□□□ -1.14
CDH19-203ENST00000540086 TRIM75PA6NK02 468 aa7.91□□□□□ -1.14
CDH19-203ENST00000540086 hCG_1984214I3L0E3 225 aa7.91□□□□□ -1.14
CDH19-203ENST00000540086 YEATS4O95619 227 aa7.91□□□□□ -1.14
CDH19-203ENST00000540086 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
CDH19-203ENST00000540086 ME1P48163 572 aa7.91□□□□□ -1.14
CDH19-203ENST00000540086 SPP2Q13103 211 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms