RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 COL4A1P02462 1669 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 UBE2Q2LH0YL09 131 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 IKBKBO14920 756 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 KINO60870 393 aaKnown RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 TAF5LO75529 589 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 ZBTB48P10074 688 aaPredicted RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 ETF1P62495 437 aaKnown RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 SNW1Q13573 536 aaKnown RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 TUBB2AQ13885 445 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 NBPF9Q3BBW0 867 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 CCAR1Q8IX12 1150 aaKnown RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 DHX40Q8IX18 779 aaKnown RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 ELOA2Q8IYF1 753 aaPredicted RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
CCDC60-204ENST00000539847 NEK1Q96PY6 1258 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 MYD88Q99836 296 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 TUBB2BQ9BVA1 445 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 AGXT2Q9BYV1 514 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC60-204ENST00000539847 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
CCDC60-204ENST00000539847 KIAA0100Q14667 2235 aaKnown RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 MANSC4A6NHS7 340 aaPredicted RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 EFCAB8A8MWE9 144 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 H3BQV1 296 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 CBFA2T2O43439 604 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 TBC1D8O95759 1140 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 G3BP1Q13283 466 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 NMIQ13287 307 aaPredicted RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 OS9Q13438 667 aaPredicted RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 ADALQ6DHV7 355 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 CTR9Q6PD62 1173 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 KSR2Q6VAB6 950 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 ANKK1Q8NFD2 765 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 TTLL11Q8NHH1 800 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 IPO4Q8TEX9 1081 aaKnown RBP8.77□□□□□ -1.01
CCDC60-204ENST00000539847 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 MPHOSPH8Q99549 860 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 PLA2G12BQ9BX93 195 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 ANKRD2Q9GZV1 360 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 RTEL1Q9NZ71 1219 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 ZMIZ1Q9ULJ6 1067 aa8.77□□□□□ -1.01
CCDC60-204ENST00000539847 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 YEATS4O95619 227 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 MAP4K4O95819 1239 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 TUBBP07437 444 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 NBPF7P0C2Y1 421 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 PNMA6AP0CW24 399 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 CPA1P15085 419 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 ATP5JP18859 108 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 EVCP57679 992 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 PTPN12Q05209 780 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 NEXNQ0ZGT2 675 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 ELF2Q15723 593 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 CCDC158Q5M9N0 1113 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 TMEM164Q5U3C3 297 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 TTLL5Q6EMB2 1281 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 TMCO3Q6UWJ1 677 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 C15orf52Q6ZUT6 534 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 GPR161Q8N6U8 529 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 IQUBQ8NA54 791 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 LINS1Q8NG48 757 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 UBXN4Q92575 508 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 BRF1Q92994 677 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 ZNF274Q96GC6 653 aaPredicted RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 PRR14Q9BWN1 585 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 EFCC1Q9HA90 598 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 ZNF446Q9NWS9 450 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 CWC15Q9P013 229 aaKnown RBP8.76□□□□□ -1.01
CCDC60-204ENST00000539847 DNAI1Q9UI46 699 aa8.76□□□□□ -1.01
CCDC60-204ENST00000539847 PI4KAP2A4QPH2 592 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 ZSCAN12O43309 604 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 SFPQP23246 707 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 IGHMBP2P38935 993 aaKnown RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 NLRP12P59046 1061 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 FKBP1AP62942 108 aaKnown RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 NR1H3Q13133 447 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 NAA30Q147X3 362 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 SUPT20HL1Q3ZLR7 823 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 C11orf57Q6ZUT1 292 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 MOB2Q70IA6 237 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 FERMT3Q86UX7 667 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 FMR1NBQ8N0W7 255 aaPredicted RBP8.75□□□□□ -1.01
CCDC60-204ENST00000539847 PI4KAP1Q8N8J0 262 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 KCNG4Q8TDN1 519 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 STK32AQ8WU08 396 aa8.75□□□□□ -1.01
CCDC60-204ENST00000539847 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms