RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 SYNGAP1Q96PV0 1343 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 TLR3O15455 904 aaKnown RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 C6orf222P0C671 652 aaPredicted RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 ZNF865P0CJ78 1059 aaPredicted RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 ATP5JP18859 108 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 DNAJB2P25686 324 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 EPHB4P54760 987 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 PPIGQ13427 754 aaKnown RBP eCLIP8.61□□□□□ -1.03
LDHB-208ENST00000539782 UBE3CQ15386 1083 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 SIAH1Q8IUQ4 282 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 STK11IPQ8N1F8 1099 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 ANKRD35Q8N283 1001 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 PCSK9Q8NBP7 692 aaKnown RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 NUP88Q99567 741 aaPredicted RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 HAUS7Q99871 368 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 ZNF214Q9UL59 606 aaPredicted RBP8.61□□□□□ -1.03
LDHB-208ENST00000539782 DDX19BQ9UMR2 479 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 ADAMTS5Q9UNA0 930 aa8.61□□□□□ -1.03
LDHB-208ENST00000539782 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 TIMP1P01033 207 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 ITGB8P26012 769 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 KCNA10Q16322 511 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 CTR9Q6PD62 1173 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 PSRC1Q6PGN9 363 aaPredicted RBP8.6□□□□□ -1.03
LDHB-208ENST00000539782 NOL8Q76FK4 1167 aaKnown RBP8.6□□□□□ -1.03
LDHB-208ENST00000539782 ANKRD33Q7Z3H0 272 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 CPXCR1Q8N123 301 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 TMEM199Q8N511 208 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 PRPF38AQ8NAV1 312 aaKnown RBP8.6□□□□□ -1.03
LDHB-208ENST00000539782 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 REPS2Q8NFH8 660 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 TIFAQ96CG3 184 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 GPATCH3Q96I76 525 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 MTIF3Q9H2K0 278 aaKnown RBP8.6□□□□□ -1.03
LDHB-208ENST00000539782 ZNF287Q9HBT7 754 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 FBXO40Q9UH90 709 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 UNC80Q8N2C7 3258 aa8.6□□□□□ -1.03
LDHB-208ENST00000539782 ELP1O95163 1332 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 A0A0U1RQG5 324 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 F5H6K3 240 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 NDUFB10O96000 172 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 TDO2P48775 406 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 KLRC3Q07444 240 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 IKQ13123 557 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 ACVR2BQ13705 512 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 GRIN2CQ14957 1233 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 MFSD5Q6N075 450 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 ZNF444Q8N0Y2 327 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 PPM1EQ8WY54 764 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.03
LDHB-208ENST00000539782 PPP1R12CQ9BZL4 782 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 PUS7LQ9H0K6 701 aaKnown RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 ABHD16BQ9H3Z7 469 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 ZNF576Q9H609 170 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 RAVER2Q9HCJ3 691 aaKnown RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 NYAP2Q9P242 653 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 MSRAQ9UJ68 235 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 FEM1BQ9UK73 627 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 PLXNA1Q9UIW2 1896 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 COL11A1P12107 1806 aaPredicted RBP8.59□□□□□ -1.03
LDHB-208ENST00000539782 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
LDHB-208ENST00000539782 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
LDHB-208ENST00000539782 LAMA2P24043 3122 aaKnown RBP8.58□□□□□ -1.04
LDHB-208ENST00000539782 MYADML2A6NDP7 307 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 SNAI1O95863 264 aaPredicted RBP8.58□□□□□ -1.04
LDHB-208ENST00000539782 APPP05067 770 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 ASGR1P07306 291 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 RASA1P20936 1047 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 CST5P28325 142 aaPredicted RBP8.58□□□□□ -1.04
LDHB-208ENST00000539782 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 GIMAP6Q6P9H5 292 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 MAMDC4Q6UXC1 1216 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 ARMCX2Q7L311 632 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 KLHDC9Q8NEP7 349 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 CHST13Q8NET6 341 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 LRRCC1Q9C099 1032 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 HOMER2Q9NSB8 354 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 TBX21Q9UL17 535 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 RIPK3Q9Y572 518 aa8.58□□□□□ -1.04
LDHB-208ENST00000539782 ARVCFO00192 962 aa8.57□□□□□ -1.04
LDHB-208ENST00000539782 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
LDHB-208ENST00000539782 ATP2A1O14983 1001 aa8.57□□□□□ -1.04
LDHB-208ENST00000539782 ZEB2O60315 1214 aa8.57□□□□□ -1.04
LDHB-208ENST00000539782 PRDM1O75626 825 aa8.57□□□□□ -1.04
LDHB-208ENST00000539782 CHGBP05060 677 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms