RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 RUFY2Q8WXA3 655 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 TMEM47Q9BQJ4 181 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 CTNNA3Q9UI47 895 aa18.49■□□□□ 0.55
CIT-210ENST00000539413 ZBED4O75132 1171 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 TFRCP02786 760 aaKnown RBP18.48■□□□□ 0.55
CIT-210ENST00000539413 FCER1AP12319 257 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 STAT2P52630 851 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 SNRNP48Q6IEG0 339 aaKnown RBP18.48■□□□□ 0.55
CIT-210ENST00000539413 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 KCTD1Q719H9 257 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 ABRAQ8N0Z2 381 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 CPXCR1Q8N123 301 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 ESR2Q92731 530 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 ZKSCAN3Q9BRR0 538 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 TEX13BQ9BXU2 312 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
CIT-210ENST00000539413 TOP1P11387 765 aaKnown RBP18.47■□□□□ 0.55
CIT-210ENST00000539413 CCND3P30281 292 aaPredicted RBP18.47■□□□□ 0.55
CIT-210ENST00000539413 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
CIT-210ENST00000539413 PTH1RQ03431 593 aa18.47■□□□□ 0.55
CIT-210ENST00000539413 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
CIT-210ENST00000539413 FAM160B2Q86V87 743 aa18.47■□□□□ 0.55
CIT-210ENST00000539413 MMP19Q99542 508 aa18.47■□□□□ 0.55
CIT-210ENST00000539413 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
CIT-210ENST00000539413 CTDP1Q9Y5B0 961 aaPredicted RBP18.47■□□□□ 0.55
CIT-210ENST00000539413 B4E1Z4 1266 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 SGSM2O43147 1006 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 KDM4AO75164 1064 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 IGHA2P01877 340 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 CYP2C19P33261 490 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 COPB2P35606 906 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 IKQ13123 557 aaPredicted RBP18.46■□□□□ 0.55
CIT-210ENST00000539413 MFSD14CQ5VZR4 134 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 CHURC1Q8WUH1 139 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 TTC14Q96N46 770 aa18.46■□□□□ 0.55
CIT-210ENST00000539413 PLA2G6O60733 806 aa18.45■□□□□ 0.54
CIT-210ENST00000539413 FARP2O94887 1054 aaPredicted RBP18.45■□□□□ 0.54
CIT-210ENST00000539413 PGK2P07205 417 aa18.45■□□□□ 0.54
CIT-210ENST00000539413 KCTD2Q14681 263 aa18.45■□□□□ 0.54
CIT-210ENST00000539413 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
CIT-210ENST00000539413 DCAF4Q8WV16 495 aa18.45■□□□□ 0.54
CIT-210ENST00000539413 MKI67P46013 3256 aaKnown RBP18.45■□□□□ 0.54
CIT-210ENST00000539413 KIAA0100Q14667 2235 aaKnown RBP18.45■□□□□ 0.54
CIT-210ENST00000539413 FDX1P10109 184 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 OAZ1P54368 228 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 OLFML2BQ68BL8 750 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 SLC5A4Q9NY91 659 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 ZSWIM5Q9P217 1185 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 PRR12Q9ULL5 1215 aa18.44■□□□□ 0.54
CIT-210ENST00000539413 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
CIT-210ENST00000539413 PDHBP11177 359 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 CAPN2P17655 700 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 NT5C2P49902 561 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 SNAP25P60880 206 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 IQCA1Q86XH1 822 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 TRPV1Q8NER1 839 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 KRT23Q9C075 422 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 ZNF536O15090 1300 aa18.43■□□□□ 0.54
CIT-210ENST00000539413 CYP21A2P08686 494 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 SLC16A2P36021 539 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 ZNF792Q3KQV3 632 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 PRPF38BQ5VTL8 546 aaKnown RBP18.42■□□□□ 0.54
CIT-210ENST00000539413 LHX8Q68G74 356 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 CCDC174Q6PII3 467 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 DGKHQ86XP1 1220 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 DIS3LQ8TF46 1054 aaKnown RBP18.42■□□□□ 0.54
CIT-210ENST00000539413 AGBL1Q96MI9 1066 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
CIT-210ENST00000539413 CNNM2Q9H8M5 875 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 GPCPD1Q9NPB8 672 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 OGDHLQ9ULD0 1010 aa18.42■□□□□ 0.54
CIT-210ENST00000539413 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
CIT-210ENST00000539413 CYBAP13498 195 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 CNGA1P29973 690 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
CIT-210ENST00000539413 BMP2KLQ5H9B9 411 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 BTNL9Q6UXG8 535 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 PAWRQ96IZ0 340 aaKnown RBP18.41■□□□□ 0.54
CIT-210ENST00000539413 HOMER2Q9NSB8 354 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
CIT-210ENST00000539413 TAF6LQ9Y6J9 622 aa18.41■□□□□ 0.54
CIT-210ENST00000539413 SNHG28P0DPA3 235 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 PRAMEF19Q5SWL8 479 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 CYB5R4Q7L1T6 521 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.4■□□□□ 0.54
CIT-210ENST00000539413 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
CIT-210ENST00000539413 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 MAP4K1Q92918 833 aa18.4■□□□□ 0.54
CIT-210ENST00000539413 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms