RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KLHL3Q9UH77 587 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ZMYM5Q9UJ78 669 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 RNF112Q9ULX5 631 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SHISA3A0PJX4 238 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PRR33A8MZF0 331 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 H7BY64 318 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GSNP06396 782 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SOX5P35711 763 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CDK7P50613 346 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GYS2P54840 703 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PHC1P78364 1004 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LACTBP83111 547 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 OCRLQ01968 901 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ID3Q02535 119 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GSTM4Q03013 218 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 IFRD2Q12894 506 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ADGRE1Q14246 886 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SNX17Q15036 470 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 NR0B2Q15466 257 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CHRNA2Q15822 529 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TM4SF20Q53R12 229 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FAM209AQ5JX71 171 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LYPD4Q6UWN0 246 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SEZ6L2Q6UXD5 910 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 UNC5AQ6ZN44 842 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 BRINP3Q76B58 766 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 OTOP1Q7RTM1 612 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 THNSL2Q86YJ6 484 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SCLYQ96I15 445 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 MS4A5Q9H3V2 200 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PCDH12Q9NPG4 1184 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DISC1Q9NRI5 854 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LCHNA4D1U4 455 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 AGRPO00253 132 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FSCN2O14926 492 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 U2SURPO15042 1029 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PDPK1O15530 556 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LRRN2O75325 713 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 BMP4P12644 408 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ELNP15502 786 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 YBX3P16989 372 aaKnown RBP eCLIP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 MX2P20592 715 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 COL8A1P27658 744 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 IL12RB1P42701 662 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ID4P47928 161 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FNTBP49356 437 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GABREP78334 506 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 IKBKEQ14164 716 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SLBPQ14493 270 aaKnown RBP eCLIP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 RNF219Q5W0B1 726 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 RIOX2Q8IUF8 465 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DMRTC2Q8IXT2 367 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 IL22RA1Q8N6P7 574 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 BRF1Q92994 677 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PUS7LQ9H0K6 701 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GBP3Q9H0R5 595 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CCDC8Q9H0W5 538 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 RNF208Q9H0X6 261 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CHST12Q9NRB3 414 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FBLN5Q9UBX5 448 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ZC3H7BQ9UGR2 993 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 RAPGEFL1Q9UHV5 662 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FBXL7Q9UJT9 491 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PCDHA4Q9UN74 947 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 HMGB1P1B2RPK0 211 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ULK1O75385 1050 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TP53P04637 393 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 PHKG2P15735 406 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GRK4P32298 578 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CEBPAP49715 358 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CLCN7P51798 805 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 MBLAC2Q68D91 279 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 POMZP3Q6PJE2 187 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CHSY3Q70JA7 882 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FILIP1Q7Z7B0 1213 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 RNF180Q86T96 592 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DHX37Q8IY37 1157 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ARHGEF39Q8N4T4 335 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FAM83CQ9BQN1 747 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 METTL22Q9BUU2 404 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SSBP4Q9BWG4 385 aaPredicted RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SPATA9Q9BWV2 254 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SUCOQ9UBS9 1254 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GTF2IRD1Q9UHL9 959 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 VAV3Q9UKW4 847 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 KCNH3Q9ULD8 1083 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 G3BP2Q9UN86 482 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TRIM75PA6NK02 468 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TMPRSS2O15393 492 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 DNAJC6O75061 913 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ARIH2O95376 493 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 ADAMTS2O95450 1211 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 SPATA31C1P0DKV0 1188 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 BPIP17213 487 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 GPR15P49685 360 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 USP11P51784 963 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 LAPTM5Q13571 262 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 FAM50AQ14320 339 aaKnown RBP1.49□□□□□ -2.17
HIF1A-204ENST00000539097 TTLL4Q14679 1199 aa1.49□□□□□ -2.17
HIF1A-204ENST00000539097 CXorf57Q6NSI4 855 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms