RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 ZNRF3Q9ULT6 936 aa23.29■■□□□ 1.32
DDX55-205ENST00000538744 FAM196BA6NMK8 535 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 SLURP2P0DP57 97 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 GNA11P29992 359 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 GPATCH4Q5T3I0 446 aaKnown RBP23.28■■□□□ 1.32
DDX55-205ENST00000538744 OGFOD1Q8N543 542 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 RASGRP4Q8TDF6 673 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 FER1L6Q2WGJ9 1857 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 A0A087WWV3 80 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 BECN2A8MW95 431 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 POLR2DO15514 142 aaKnown RBP23.28■■□□□ 1.32
DDX55-205ENST00000538744 MCM7P33993 719 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 DLGAP5Q15398 846 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 KANSL2Q9H9L4 492 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 GPCPD1Q9NPB8 672 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 NYAP2Q9P242 653 aa23.28■■□□□ 1.32
DDX55-205ENST00000538744 ATF5Q9Y2D1 282 aaPredicted RBP23.28■■□□□ 1.32
DDX55-205ENST00000538744 ARFGEF1Q9Y6D6 1849 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 ESYT2A0FGR8 921 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 PNOCQ13519 176 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 DPCR1Q3MIW9 517 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 DALRD3Q5D0E6 543 aaKnown RBP23.27■■□□□ 1.32
DDX55-205ENST00000538744 KANK3Q6NY19 840 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 TMEM179Q6ZVK1 233 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 BPIFA3Q9BQP9 254 aa23.27■■□□□ 1.32
DDX55-205ENST00000538744 SMCO2A6NFE2 343 aa23.26■■□□□ 1.31
DDX55-205ENST00000538744 CCDC96Q2M329 555 aa23.26■■□□□ 1.31
DDX55-205ENST00000538744 KRT25Q7Z3Z0 450 aa23.26■■□□□ 1.31
DDX55-205ENST00000538744 DHX40Q8IX18 779 aaKnown RBP23.26■■□□□ 1.31
DDX55-205ENST00000538744 MKL1Q969V6 931 aa23.26■■□□□ 1.31
DDX55-205ENST00000538744 BIN1O00499 593 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 ARL6IP4Q66PJ3 421 aaKnown RBP23.25■■□□□ 1.31
DDX55-205ENST00000538744 USP49Q70CQ1 688 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 AGBL3Q8NEM8 1001 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 SERTAD1Q9UHV2 236 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 VWA3AA6NCI4 1184 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 EEF2P13639 858 aaKnown RBP23.25■■□□□ 1.31
DDX55-205ENST00000538744 MSNP26038 577 aaKnown RBP23.25■■□□□ 1.31
DDX55-205ENST00000538744 ABCB5Q2M3G0 1257 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 CCDC34Q96HJ3 373 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 CSRNP1Q96S65 589 aa23.25■■□□□ 1.31
DDX55-205ENST00000538744 ZNF70Q9UC06 446 aaPredicted RBP23.25■■□□□ 1.31
DDX55-205ENST00000538744 ACTN4O43707 911 aaKnown RBP23.24■■□□□ 1.31
DDX55-205ENST00000538744 MDM2Q00987 491 aaPredicted RBP23.24■■□□□ 1.31
DDX55-205ENST00000538744 INF2Q27J81 1249 aa23.24■■□□□ 1.31
DDX55-205ENST00000538744 AOPEPQ8N6M6 819 aa23.24■■□□□ 1.31
DDX55-205ENST00000538744 DCAF4Q8WV16 495 aa23.24■■□□□ 1.31
DDX55-205ENST00000538744 SYMPKQ92797 1274 aaKnown RBP23.24■■□□□ 1.31
DDX55-205ENST00000538744 JMJD4Q9H9V9 463 aa23.24■■□□□ 1.31
DDX55-205ENST00000538744 HERC5Q9UII4 1024 aaKnown RBP23.24■■□□□ 1.31
DDX55-205ENST00000538744 ZBTB12Q9Y330 459 aaPredicted RBP23.24■■□□□ 1.31
DDX55-205ENST00000538744 ICA1Q05084 483 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 SEPT2Q15019 361 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 POSTNQ15063 836 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 PPP1R18Q6NYC8 613 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 ADGRF4Q8IZF3 695 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 PDILTQ8N807 584 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 C4orf32Q8N8J7 132 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 EPSTI1Q96J88 318 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 TRIM5Q9C035 493 aa23.23■■□□□ 1.31
DDX55-205ENST00000538744 PNMA6FA0A0J9YX94 578 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 CLRN2A0PK11 232 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 TCP10L2B9ZVM9 353 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 NONOQ15233 471 aaKnown RBP eCLIP23.22■■□□□ 1.31
DDX55-205ENST00000538744 MTMR14Q8NCE2 650 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 ZKSCAN5Q9Y2L8 839 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 PCDHA5Q9Y5H7 936 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 CLCN1P35523 988 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 ZNF75DP51815 510 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 SHROOM1Q2M3G4 852 aaPredicted RBP23.22■■□□□ 1.31
DDX55-205ENST00000538744 RBM26Q5T8P6 1007 aaKnown RBP23.22■■□□□ 1.31
DDX55-205ENST00000538744 TTBK2Q6IQ55 1244 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 KCTD1Q719H9 257 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 PLA2G4DQ86XP0 818 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 REXO1Q8N1G1 1221 aaKnown RBP23.22■■□□□ 1.31
DDX55-205ENST00000538744 FAM151AQ8WW52 585 aa23.22■■□□□ 1.31
DDX55-205ENST00000538744 FOXN1O15353 648 aa23.21■■□□□ 1.31
DDX55-205ENST00000538744 GDF11O95390 407 aa23.21■■□□□ 1.31
DDX55-205ENST00000538744 LONP1P36776 959 aaKnown RBP23.21■■□□□ 1.31
DDX55-205ENST00000538744 CXCL9Q07325 125 aa23.21■■□□□ 1.31
DDX55-205ENST00000538744 FKBP1CQ5VVH2 108 aa23.21■■□□□ 1.31
DDX55-205ENST00000538744 SLFN13Q68D06 897 aa23.21■■□□□ 1.31
DDX55-205ENST00000538744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.21■■□□□ 1.31
DDX55-205ENST00000538744 PYM1Q9BRP8 204 aaKnown RBP23.21■■□□□ 1.31
DDX55-205ENST00000538744 GOLGA6L6A8MZA4 724 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 LAD1O00515 517 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 ADCY7P51828 1080 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 DHX58Q96C10 678 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 MTMR8Q96EF0 704 aa23.2■■□□□ 1.3
DDX55-205ENST00000538744 A0A087X0B3 334 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 SLFN14P0C7P3 912 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 IL17AQ16552 155 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 CIAPIN1Q6FI81 312 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 SIAH1Q8IUQ4 282 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 SMARCE1Q969G3 411 aa23.19■■□□□ 1.3
DDX55-205ENST00000538744 COA7Q96BR5 231 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms