RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CNBD1Q8NA66 436 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 OR8K1Q8NGG5 319 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 EYA1Q99502 592 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 LMBRD1Q9NUN5 540 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 BAG2O95816 211 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 ADCY8P40145 1251 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 LRMPQ12912 555 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 KMT5BQ4FZB7 885 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-208ENST00000538570 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
COL4A6-208ENST00000538570 TYW1Q9NV66 732 aaKnown RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 TEKT1Q969V4 418 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 IWS1Q96ST2 819 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 XRCC5P13010 732 aaKnown RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 MORC3Q14149 939 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 HAUS1Q96CS2 278 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 IVNS1ABPQ9Y6Y0 642 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 ADAMTS12P58397 1594 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 A0A087WUV0 522 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 HADHQ16836 314 aaKnown RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 CCDC93Q567U6 631 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 GJC2Q5T442 439 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 G2E3Q7L622 706 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 STAMQ92783 540 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 PHACTR3Q96KR7 559 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 ZFXP17010 805 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-208ENST00000538570 C8orf37Q96NL8 207 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 BABAM1Q9NWV8 329 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 PPP1R9AQ9ULJ8 1098 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
COL4A6-208ENST00000538570 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 M0QZ92 97 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 GNPATO15228 680 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 STAM2O75886 525 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 ABCB4P21439 1286 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 SKOR1P84550 965 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 ARHGAP4P98171 946 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 REXO1Q8N1G1 1221 aaKnown RBP10.9□□□□□ -0.66
COL4A6-208ENST00000538570 LPIN2Q92539 896 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 GJA3Q9Y6H8 435 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 JAK2O60674 1132 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 DACT3Q96B18 629 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-208ENST00000538570 YY1AP1Q9H869 796 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 PDE11AQ9HCR9 933 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 MED4Q9NPJ6 270 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 VPS54Q9P1Q0 977 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 IFNB1P01574 187 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 HOXC9P31274 260 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 ADALQ6DHV7 355 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 TPH2Q8IWU9 490 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 TESK2Q96S53 571 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 THAP12O43422 761 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 CFBP00751 764 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 GFAPP14136 432 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 MUM1L1Q5H9M0 696 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 TRIM50Q86XT4 487 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 MYOCDQ8IZQ8 938 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 RDH13Q8NBN7 331 aa10.9□□□□□ -0.66
COL4A6-208ENST00000538570 SPATA5Q8NB90 893 aa10.9□□□□□ -0.67
COL4A6-208ENST00000538570 HOOK2Q96ED9 719 aa10.9□□□□□ -0.67
COL4A6-208ENST00000538570 SCYL1Q96KG9 808 aa10.9□□□□□ -0.67
COL4A6-208ENST00000538570 ANKFY1Q9P2R3 1169 aa10.9□□□□□ -0.67
COL4A6-208ENST00000538570 YTHDC2Q9H6S0 1430 aaKnown RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 CD2APQ9Y5K6 639 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 WDR62O43379 1518 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 N4BP1O75113 896 aaKnown RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 DSCC1Q9BVC3 393 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 KIAA1468Q9P260 1216 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 PPP2R2CQ9Y2T4 447 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF532Q9HCE3 1301 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 E7EWF7 191 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 CYP2J2P51589 502 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 IRX1P78414 480 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 ST7Q9NRC1 585 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 SPECC1L-ADORA2AF8WAN1 911 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 PFKFB1P16118 471 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 TCP1P17987 556 aaKnown RBP10.89□□□□□ -0.67
COL4A6-208ENST00000538570 PCYT1AP49585 367 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 BBOF1Q8ND07 529 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 CFAP61Q8NHU2 1237 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 DEPTORQ8TB45 409 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 SDCCAG3Q96C92 435 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 CPXCR1Q8N123 301 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 MROH5Q6ZUA9 1318 aa10.89□□□□□ -0.67
COL4A6-208ENST00000538570 BUB1O43683 1085 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 YARSP54577 528 aaKnown RBP10.88□□□□□ -0.67
COL4A6-208ENST00000538570 SCYL2Q6P3W7 929 aa10.88□□□□□ -0.67
COL4A6-208ENST00000538570 ZNF790Q6PG37 636 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 284.3 ms