RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ABCC4O15439 1325 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 H0YCG3 227 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PCP11498 1178 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 NR1D1P20393 614 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 ME3Q16798 604 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 PDZD4Q76G19 769 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 NOSTRINQ8IVI9 506 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 DHTKD1Q96HY7 919 aaPredicted RBP7.58□□□□□ -1.2
SORT1-209ENST00000538502 PARD6BQ9BYG5 372 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 YY1AP1Q9H869 796 aa7.58□□□□□ -1.2
SORT1-209ENST00000538502 DNMT1P26358 1616 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 LRMPQ12912 555 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 NNTQ13423 1086 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 B4E1Z4 1266 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SEMA3EO15041 775 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 MBD4O95243 580 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SESN3P58005 492 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 CASP8Q14790 479 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 PUM3Q15397 648 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 LONRF3Q496Y0 759 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SLC35F6Q8N357 371 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 HELBQ8NG08 1087 aaPredicted RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 MID2Q9UJV3 735 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 EYA2O00167 538 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 PFDN6O15212 129 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 H2AFZP0C0S5 128 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 ATP5JP18859 108 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
SORT1-209ENST00000538502 H2AFVQ71UI9 128 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 PLIN2Q99541 437 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SOS2Q07890 1332 aaPredicted RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 CTAGE3PQ8IX95 158 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 TEX9Q8N6V9 391 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 ARMC2Q8NEN0 867 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 PIP4K2CQ8TBX8 421 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 XAB2Q9HCS7 855 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 LCMT1Q9UIC8 334 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 PGRMC1O00264 195 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 EXOC5O00471 708 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SEC31AO94979 1220 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 APOEP02649 317 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 PSMD7P51665 324 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 HERC4Q5GLZ8 1057 aaPredicted RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 PDZD8Q8NEN9 1154 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 MRRFQ96E11 262 aaKnown RBP7.57□□□□□ -1.2
SORT1-209ENST00000538502 POLR3EQ9NVU0 708 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 STK17AQ9UEE5 414 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 BAG5Q9UL15 447 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 PCDHB13Q9Y5F0 798 aa7.57□□□□□ -1.2
SORT1-209ENST00000538502 SBNO2Q9Y2G9 1366 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 E7EWF7 191 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 RPN1P04843 607 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 PYGBP11216 843 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 KPNA2P52292 529 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 NR1H3Q13133 447 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 SLFN12Q8IYM2 578 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 BPIFA3Q9BQP9 254 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 TMEM60Q9H2L4 133 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 PRPF6O94906 941 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 TRAPPC10P48553 1259 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 RINT1Q6NUQ1 792 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 PDCD7Q8N8D1 485 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 TCP11Q8WWU5 503 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 DESI2Q9BSY9 194 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 MRPL44Q9H9J2 332 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 ADGBQ8N7X0 1667 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 EXOC3O60645 756 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 PDE6CP51160 858 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 POLE2P56282 527 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 TMED1Q13445 227 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 IFT122Q9HBG6 1241 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 FAM207AQ9NSI2 230 aaPredicted RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 TNNQ9UQP3 1299 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 PLCH2O75038 1416 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 ARHGAP31Q2M1Z3 1444 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 MAST1Q9Y2H9 1570 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 FRMD3A2A2Y4 597 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 TMEM232C9JQI7 657 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 HNRNPCL1O60812 293 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 ABCD1P33897 745 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 CUL4AQ13619 759 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
SORT1-209ENST00000538502 ZNF449Q6P9G9 518 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 FANCLQ9NW38 375 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 DAAM1Q9Y4D1 1078 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 MAST3O60307 1309 aa7.56□□□□□ -1.2
SORT1-209ENST00000538502 GPAA1O43292 621 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms