RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 SNRNP48Q6IEG0 339 aaKnown RBP10.29□□□□□ -0.76
DDB1-212ENST00000538470 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
DDB1-212ENST00000538470 TICAM2Q86XR7 235 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 NUP88Q99567 741 aaPredicted RBP10.29□□□□□ -0.76
DDB1-212ENST00000538470 LBHD1Q9BQE6 289 aaPredicted RBP10.29□□□□□ -0.76
DDB1-212ENST00000538470 TINF2Q9BSI4 451 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 FBXO40Q9UH90 709 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
DDB1-212ENST00000538470 DNAH12Q6ZR08 3092 aa10.29□□□□□ -0.76
DDB1-212ENST00000538470 PRDM1O75626 825 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 PGK2P07205 417 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 TSPY3P0CV98 308 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 TSPY8P0CW00 308 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 ATN1P54259 1190 aaPredicted RBP10.28□□□□□ -0.76
DDB1-212ENST00000538470 PPARAQ07869 468 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 AAMPQ13685 434 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 LRRC41Q15345 812 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 SLC39A5Q6ZMH5 540 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 RNF180Q86T96 592 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 CHST13Q8NET6 341 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
DDB1-212ENST00000538470 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
DDB1-212ENST00000538470 LCTP09848 1927 aa10.27□□□□□ -0.76
DDB1-212ENST00000538470 DNAJC25-GNG10A0A024R161 153 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 BMP3P12645 472 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 STAT2P52630 851 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
DDB1-212ENST00000538470 HDAC1Q13547 482 aaPredicted RBP10.27□□□□□ -0.77
DDB1-212ENST00000538470 ANO1Q5XXA6 986 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 MAMDC4Q6UXC1 1216 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 FAM160B2Q86V87 743 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 LRRC47Q8N1G4 583 aaKnown RBP10.27□□□□□ -0.77
DDB1-212ENST00000538470 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 EVI5LQ96CN4 794 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 DDX11Q96FC9 970 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 GMCL1Q96IK5 515 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
DDB1-212ENST00000538470 ATP11BQ9Y2G3 1177 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDB1-212ENST00000538470 ZMYM6O95789 1325 aa10.27□□□□□ -0.77
DDB1-212ENST00000538470 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 PLA2G6O60733 806 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 ZNF865P0CJ78 1059 aaPredicted RBP10.26□□□□□ -0.77
DDB1-212ENST00000538470 ADCYAP1R1P41586 468 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 TFAP4Q01664 338 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 TKFCQ3LXA3 575 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 TRIM60Q495X7 471 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 PDLIM7Q9NR12 457 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 ANAPC4Q9UJX5 808 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 FAM184BQ9ULE4 1060 aa10.26□□□□□ -0.77
DDB1-212ENST00000538470 TSPY2A6NKD2 308 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 FOXP2O15409 715 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 ORC4O43929 436 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 ADAMTS4O75173 837 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
DDB1-212ENST00000538470 SLC1A4P43007 532 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 PDE1AP54750 535 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 ALX1Q15699 326 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 ANKRD45Q5TZF3 282 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 CPXCR1Q8N123 301 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 ANKRD35Q8N283 1001 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 CHURC1Q8WUH1 139 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 TSEN34Q9BSV6 310 aaKnown RBP10.25□□□□□ -0.77
DDB1-212ENST00000538470 ACAD9Q9H845 621 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
DDB1-212ENST00000538470 HELLSQ9NRZ9 838 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 RIPK3Q9Y572 518 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 SYNRGQ9UMZ2 1314 aa10.25□□□□□ -0.77
DDB1-212ENST00000538470 A0A1W2PQ45 241 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 A0A1W2PQY0 241 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 TMEM232C9JQI7 657 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 DUSP11O75319 330 aaKnown RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 PGK1P00558 417 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 TAL1P17542 331 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 IKQ13123 557 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 FAM109BQ6ICB4 259 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 CCDC129Q6ZRS4 1044 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 DEFB123Q8N688 67 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 STAG1Q8WVM7 1258 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
DDB1-212ENST00000538470 PRDM5Q9NQX1 630 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 ZHX1Q9UKY1 873 aaPredicted RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 ISY1Q9ULR0 285 aaKnown RBP10.24□□□□□ -0.77
DDB1-212ENST00000538470 CUL9Q8IWT3 2517 aa10.23□□□□□ -0.77
DDB1-212ENST00000538470 SNAI1O95863 264 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms