RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 TRHDEQ9UKU6 1024 aa11.48□□□□□ -0.57
CD9-207ENST00000538418 ZNF451Q9Y4E5 1061 aa11.48□□□□□ -0.57
CD9-207ENST00000538418 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
CD9-207ENST00000538418 IQGAP2Q13576 1575 aa11.48□□□□□ -0.57
CD9-207ENST00000538418 SYNGAP1Q96PV0 1343 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 LOC100289279A0A1B0GTE1 492 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 DLX3O60479 287 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 ID3Q02535 119 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 SUZ12Q15022 739 aaKnown RBP11.47□□□□□ -0.57
CD9-207ENST00000538418 ANKRD39Q53RE8 183 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 NXNQ6DKJ4 435 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 CNTD1Q8N815 330 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 IFT22Q9H7X7 185 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 WHRNQ9P202 907 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 AKT3Q9Y243 479 aa11.47□□□□□ -0.57
CD9-207ENST00000538418 KDM6BO15054 1643 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 MX2P20592 715 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 ALAS2P22557 587 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 NLRP12P59046 1061 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 CFAP100Q494V2 611 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 TRIM59Q8IWR1 403 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 VWA5B2Q8N398 1253 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 PTPRN2Q92932 1015 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
CD9-207ENST00000538418 DPH2Q9BQC3 489 aaPredicted RBP11.46□□□□□ -0.57
CD9-207ENST00000538418 FBRSQ9HAH7 460 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 CHST12Q9NRB3 414 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 ZNF180Q9UJW8 692 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 NOB1Q9ULX3 412 aaKnown RBP11.46□□□□□ -0.57
CD9-207ENST00000538418 EMC9Q9Y3B6 208 aa11.46□□□□□ -0.57
CD9-207ENST00000538418 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 GOLGA6CA6NDK9 693 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 GOLGA6BA6NDN3 693 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 GABRDO14764 452 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 GOLGA6DP0CG33 693 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 CD247P20963 164 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 NTF4P34130 210 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 BRD3Q15059 726 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 UBE2R2Q712K3 238 aaPredicted RBP11.45□□□□□ -0.58
CD9-207ENST00000538418 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
CD9-207ENST00000538418 PI4K2BQ8TCG2 481 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 CYB5D2Q8WUJ1 264 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 BTN2A2Q8WVV5 523 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 RCC1LQ96I51 464 aaKnown RBP11.45□□□□□ -0.58
CD9-207ENST00000538418 ZNF700Q9H0M5 742 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 RAD18Q9NS91 495 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 GOLGA6AQ9NYA3 693 aa11.45□□□□□ -0.58
CD9-207ENST00000538418 NEMP1O14524 444 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 TM4SF5O14894 197 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 ZEB2O60315 1214 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 APBA3O96018 575 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 LDHAP00338 332 aaKnown RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 BPIP17213 487 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 AFF1P51825 1210 aaKnown RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 NKG7Q16617 165 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 SLC4A10Q6U841 1118 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 OR2W6PQ8NHA6 318 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 MAGEB10Q96LZ2 347 aaPredicted RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 MKRN2Q9H000 416 aaKnown RBP11.44□□□□□ -0.58
CD9-207ENST00000538418 STARD13Q9Y3M8 1113 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 TEX14Q8IWB6 1497 aa11.44□□□□□ -0.58
CD9-207ENST00000538418 BLACEA4D250 179 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 RFPL1O75677 317 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 DLGAP3O95886 979 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
CD9-207ENST00000538418 GFOD2Q3B7J2 385 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 C20orf204Q6ZNR8 217 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 RNF214Q8ND24 703 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 COG1Q8WTW3 980 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 KCTD13Q8WZ19 329 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 APOBEC2Q9Y235 224 aaKnown RBP11.43□□□□□ -0.58
CD9-207ENST00000538418 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
CD9-207ENST00000538418 TNKSO95271 1327 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 TCRBV16S1A1N1A0A5B0 115 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 PYGMP11217 842 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 ID4P47928 161 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 VPS72Q15906 364 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 WFDC8Q8IUA0 241 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 C7orf61Q8IZ16 206 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 ARHGEF39Q8N4T4 335 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 CRIM1Q9NZV1 1036 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
CD9-207ENST00000538418 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
CD9-207ENST00000538418 B4E1Z4 1266 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 SHOXO15266 292 aa11.41□□□□□ -0.58
CD9-207ENST00000538418 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
CD9-207ENST00000538418 ABLIM3O94929 683 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms