RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 GADD45BO75293 160 aaPredicted RBP17.4■□□□□ 0.38
PXN-208ENST00000538144 BMP3P12645 472 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 KRT2P35908 639 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 ZSCAN23Q3MJ62 389 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 TYW1BQ6NUM6 668 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
PXN-208ENST00000538144 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 FOXP1Q9H334 677 aaPredicted RBP17.4■□□□□ 0.38
PXN-208ENST00000538144 SH2D4AQ9H788 454 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 WDR90Q96KV7 1748 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 TMEM232C9JQI7 657 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 STXBP3O00186 592 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 NOSTRINQ8IVI9 506 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 KLRG1Q96E93 195 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 FEZ1Q99689 392 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 SCAND2PQ9GZW5 306 aaPredicted RBP17.4■□□□□ 0.38
PXN-208ENST00000538144 VCPKMTQ9H867 229 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
PXN-208ENST00000538144 USP2O75604 605 aaPredicted RBP17.39■□□□□ 0.37
PXN-208ENST00000538144 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
PXN-208ENST00000538144 NPY5RQ15761 445 aa17.39■□□□□ 0.37
PXN-208ENST00000538144 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
PXN-208ENST00000538144 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
PXN-208ENST00000538144 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
PXN-208ENST00000538144 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
PXN-208ENST00000538144 CAVIN1Q6NZI2 390 aaKnown RBP17.38■□□□□ 0.37
PXN-208ENST00000538144 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
PXN-208ENST00000538144 PNMA6FA0A0J9YX94 578 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 NAPAP54920 295 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
PXN-208ENST00000538144 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 COA7Q96BR5 231 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
PXN-208ENST00000538144 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 ZBTB5O15062 677 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 PTPRAP18433 802 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 CALML3P27482 149 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 TMEM63CQ9P1W3 806 aa17.37■□□□□ 0.37
PXN-208ENST00000538144 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 SNAP25P60880 206 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 DGKZQ13574 1117 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 EARS2Q5JPH6 523 aaKnown RBP17.36■□□□□ 0.37
PXN-208ENST00000538144 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
PXN-208ENST00000538144 CDCA5Q96FF9 252 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 ELP1O95163 1332 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 PHIPQ8WWQ0 1821 aa17.36■□□□□ 0.37
PXN-208ENST00000538144 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 STAT2P52630 851 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 SPP2Q13103 211 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 QRICH1Q2TAL8 776 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 BTNL9Q6UXG8 535 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 RRAGCQ9HB90 399 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 RCOR1Q9UKL0 485 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 ZHX2Q9Y6X8 837 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 TOB1P50616 345 aaPredicted RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 UBE2HP62256 183 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 MTMR2Q13614 643 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
PXN-208ENST00000538144 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 TNFRSF25Q93038 417 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 PRR12Q9ULL5 1215 aa17.35■□□□□ 0.37
PXN-208ENST00000538144 hCG_1984214I3L0E3 225 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 ATP2B1P20020 1258 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 SF3A1Q15459 793 aaKnown RBP17.34■□□□□ 0.37
PXN-208ENST00000538144 NOL9Q5SY16 702 aaKnown RBP17.34■□□□□ 0.37
PXN-208ENST00000538144 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.34■□□□□ 0.37
PXN-208ENST00000538144 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
PXN-208ENST00000538144 ZNF280CQ8ND82 737 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 OTOFQ9HC10 1997 aa17.34■□□□□ 0.37
PXN-208ENST00000538144 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.37
PXN-208ENST00000538144 TRIM75PA6NK02 468 aa17.33■□□□□ 0.37
PXN-208ENST00000538144 NF2P35240 595 aa17.33■□□□□ 0.37
PXN-208ENST00000538144 VGLL4Q14135 290 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms