RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 FAM13BQ9NYF5 915 aa7.26□□□□□ -1.25
DDB1-210ENST00000538129 PGAP2Q9UHJ9 254 aa7.26□□□□□ -1.25
DDB1-210ENST00000538129 GDF2Q9UK05 429 aaPredicted RBP7.26□□□□□ -1.25
DDB1-210ENST00000538129 DENND2AQ9ULE3 1009 aa7.26□□□□□ -1.25
DDB1-210ENST00000538129 SUGT1Q9Y2Z0 365 aa7.26□□□□□ -1.25
DDB1-210ENST00000538129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
DDB1-210ENST00000538129 POLR2AP24928 1970 aaKnown RBP7.26□□□□□ -1.25
DDB1-210ENST00000538129 PDS5AQ29RF7 1337 aaKnown RBP7.26□□□□□ -1.25
DDB1-210ENST00000538129 DCDC2BA2VCK2 349 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 CENPBP07199 599 aaPredicted RBP7.25□□□□□ -1.25
DDB1-210ENST00000538129 BRD2P25440 801 aaKnown RBP7.25□□□□□ -1.25
DDB1-210ENST00000538129 PHKA1P46020 1223 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 TNP2Q05952 138 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 FSTL1Q12841 308 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 MFSD14BQ5SR56 506 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 AACSQ86V21 672 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 LDHDQ86WU2 507 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 CERS5Q8N5B7 392 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 SMC1BQ8NDV3 1235 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 GCC1Q96CN9 775 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 MXD3Q9BW11 206 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 RWDD1Q9H446 243 aaPredicted RBP7.25□□□□□ -1.25
DDB1-210ENST00000538129 EFCC1Q9HA90 598 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 STK17AQ9UEE5 414 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 HDAC9Q9UKV0 1011 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 SALL1Q9NSC2 1324 aa7.25□□□□□ -1.25
DDB1-210ENST00000538129 CARNS1A5YM72 827 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 IGSF3O75054 1194 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 IFIT2P09913 472 aaKnown RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 SLURP2P0DP57 97 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 ARID4AP29374 1257 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 HDLBPQ00341 1268 aaKnown RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 CHAF1AQ13111 956 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 OCLNQ16625 522 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 EAPPQ56P03 285 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 C16orf46Q6P387 395 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 KIAA0825Q8IV33 1275 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 SVOPQ8N4V2 548 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 ZGPATQ8N5A5 531 aaKnown RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 GOLGA6L1Q8N7Z2 621 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 DBNDD2Q9BQY9 259 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 CCDC8Q9H0W5 538 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 IL1RAPL2Q9NP60 686 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 MYOZ2Q9NPC6 264 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 BRD7Q9NPI1 651 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 AVENQ9NQS1 362 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 NDFIP2Q9NV92 336 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 MYH13Q9UKX3 1938 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 ZNF646O15015 1829 aaPredicted RBP7.24□□□□□ -1.25
DDB1-210ENST00000538129 ARAP2Q8WZ64 1704 aa7.24□□□□□ -1.25
DDB1-210ENST00000538129 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 TMEM88BA6NKF7 163 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 C1QTNF8P60827 252 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 DGKZQ13574 1117 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 UBAP2LQ14157 1087 aaKnown RBP7.23□□□□□ -1.25
DDB1-210ENST00000538129 GAS6Q14393 721 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 DLGAP5Q15398 846 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 KIF4BQ2VIQ3 1234 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 TBC1D10BQ4KMP7 808 aaPredicted RBP7.23□□□□□ -1.25
DDB1-210ENST00000538129 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 SPTY2D1Q68D10 685 aaPredicted RBP7.23□□□□□ -1.25
DDB1-210ENST00000538129 BTLAQ7Z6A9 289 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 CNTROBQ8N137 903 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.23□□□□□ -1.25
DDB1-210ENST00000538129 OXCT2Q9BYC2 517 aaPredicted RBP7.23□□□□□ -1.25
DDB1-210ENST00000538129 C11orf16Q9NQ32 467 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 HMG20BQ9P0W2 317 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 TTF2Q9UNY4 1162 aaKnown RBP7.23□□□□□ -1.25
DDB1-210ENST00000538129 KCNH4Q9UQ05 1017 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 JAG2Q9Y219 1238 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 AKAP11Q9UKA4 1901 aa7.23□□□□□ -1.25
DDB1-210ENST00000538129 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 EGFRP00533 1210 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 LDHBP07195 334 aaKnown RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 ATP5JP18859 108 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 IRX6P78412 446 aaPredicted RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 HHIPL2Q6UWX4 724 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 CDC37L1Q7L3B6 337 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 SMC5Q8IY18 1101 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 TRPM4Q8TD43 1214 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 DCPSQ96C86 337 aaKnown RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 IFT43Q96FT9 208 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 ZBED3Q96IU2 234 aaPredicted RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 TLR7Q9NYK1 1049 aaKnown RBP7.22□□□□□ -1.25
DDB1-210ENST00000538129 IVNS1ABPQ9Y6Y0 642 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 MAST3O60307 1309 aa7.22□□□□□ -1.25
DDB1-210ENST00000538129 ADAMTSL1Q8N6G6 1762 aa7.21□□□□□ -1.25
DDB1-210ENST00000538129 WNT10BO00744 389 aa7.21□□□□□ -1.26
DDB1-210ENST00000538129 EFSO43281 561 aa7.21□□□□□ -1.26
DDB1-210ENST00000538129 MYO1BO43795 1136 aa7.21□□□□□ -1.26
DDB1-210ENST00000538129 SMARCA5O60264 1052 aaPredicted RBP7.21□□□□□ -1.26
DDB1-210ENST00000538129 IGHDP01880 384 aa7.21□□□□□ -1.26
DDB1-210ENST00000538129 THBS1P07996 1170 aa7.21□□□□□ -1.26
DDB1-210ENST00000538129 ARAFP10398 606 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms