RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 BTBD19C9JJ37 291 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 ZBTB43O43298 467 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 PFKFB2O60825 505 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 AOC2O75106 756 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 MAP2K2P36507 400 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 SLC1A4P43007 532 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 VEGFBP49765 207 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 SREBF2Q12772 1141 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 ME3Q16798 604 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 SYNE3Q6ZMZ3 975 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 GADL1Q6ZQY3 521 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 KCTD1Q719H9 257 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 FANCBQ8NB91 859 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 NUP88Q99567 741 aaPredicted RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 ZCCHC17Q9NP64 241 aaKnown RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
CIT-209ENST00000538073 LIMCH1Q9UPQ0 1083 aa9.37□□□□□ -0.91
CIT-209ENST00000538073 A0A0G2JMZ2 1700 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 MYPNQ86TC9 1320 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 GOLGA8BA8MQT2 603 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 LARGE1O95461 756 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 RXRAP19793 462 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 CDC27P30260 824 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 KIF5BP33176 963 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 MCM2P49736 904 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.91
CIT-209ENST00000538073 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.91
CIT-209ENST00000538073 MICU3Q86XE3 530 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 FAM43AQ8N2R8 423 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 CTCFLQ8NI51 663 aaPredicted RBP9.36□□□□□ -0.91
CIT-209ENST00000538073 NUP133Q8WUM0 1156 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 SNX21Q969T3 373 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 ZSCAN31Q96LW9 406 aaPredicted RBP9.36□□□□□ -0.91
CIT-209ENST00000538073 FBXO28Q9NVF7 368 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
CIT-209ENST00000538073 FEM1BQ9UK73 627 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 MTMR7Q9Y216 660 aa9.36□□□□□ -0.91
CIT-209ENST00000538073 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 KLRF2D3W0D1 207 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 IGF2BP3O00425 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
CIT-209ENST00000538073 RAD21O60216 631 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SMARCA1P28370 1054 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 ADD1P35611 737 aaKnown RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 GNAQP50148 359 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 STAT2P52630 851 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 FUT2Q10981 343 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SCRN1Q12765 414 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 GRM1Q13255 1194 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 COG2Q14746 738 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 NTRK3Q16288 839 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 RTN1Q16799 776 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 CCDC96Q2M329 555 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SLC35G1Q2M3R5 365 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 LBX2Q6XYB7 198 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 TMTC3Q6ZXV5 915 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 NOL8Q76FK4 1167 aaKnown RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 PRPF38AQ8NAV1 312 aaKnown RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 CHURC1Q8WUH1 139 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 GTF3C6Q969F1 213 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SLF1Q9BQI6 1058 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 LZTS2Q9BRK4 669 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SPZ1Q9BXG8 430 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 ASCC2Q9H1I8 757 aaPredicted RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 RIOX1Q9H6W3 641 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
CIT-209ENST00000538073 ADAMTS5Q9UNA0 930 aa9.35□□□□□ -0.91
CIT-209ENST00000538073 ADGRA2Q96PE1 1338 aa9.34□□□□□ -0.91
CIT-209ENST00000538073 COL11A1P12107 1806 aaPredicted RBP9.34□□□□□ -0.91
CIT-209ENST00000538073 CCDC196A0A1B0GTZ2 297 aa9.34□□□□□ -0.91
CIT-209ENST00000538073 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
CIT-209ENST00000538073 PDHXO00330 501 aa9.34□□□□□ -0.91
CIT-209ENST00000538073 CYTH3O43739 400 aa9.34□□□□□ -0.91
CIT-209ENST00000538073 FLOT1O75955 427 aa9.34□□□□□ -0.91
CIT-209ENST00000538073 PLEKHA8P1O95397 391 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms