RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CNBD1Q8NA66 436 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 DMGDHQ9UI17 866 aaKnown RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF510Q9Y2H8 683 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 NUB1Q9Y5A7 615 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PCDHA5Q9Y5H7 936 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ITIH6Q6UXX5 1313 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 A1BGP04217 495 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PAX3P23760 479 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 HPDP32754 393 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 NLRP5P59047 1200 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 GUCY1B3Q02153 619 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 MREGQ8N565 214 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 FGD4Q96M96 766 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 LRRC1Q9BTT6 524 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 JADE2Q9NQC1 790 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 EPN1Q9Y6I3 576 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CYP27B1O15528 508 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CEP104O60308 925 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF24P17028 368 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PCK1P35558 622 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 SH3BGRP55822 239 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 LACTBP83111 547 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 KLC1Q07866 573 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 QPCTQ16769 361 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CMPK2Q5EBM0 449 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC122Q5T0U0 273 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ANO1Q5XXA6 986 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC129Q6ZRS4 1044 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 PIDD1Q9HB75 910 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 ABHD10Q9NUJ1 306 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 HPSEQ9Y251 543 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 WDR37Q9Y2I8 494 aa9.45□□□□□ -0.9
SRGAP1-202ENST00000537556 TEX33O43247 280 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PRC1O43663 620 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 NDUFA10O95299 355 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 GSTA2P09210 222 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PAEPP09466 180 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 NQO1P15559 274 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PBX1P40424 430 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 KRT83P78385 493 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PDE4BQ07343 736 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 NMIQ13287 307 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PABPC1LQ4VXU2 614 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 SH2D4BQ5SQS7 431 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 SFMBT2Q5VUG0 894 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 TRIM68Q6AZZ1 485 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF662Q6ZS27 426 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 TRIML1Q8N9V2 468 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 RMDN2Q96LZ7 410 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 POLD4Q9HCU8 107 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 CABP2Q9NPB3 220 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF189O75820 626 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 GYPCP04921 128 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 MYZAPP0CAP1 466 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ERVK-24P63145 666 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 BIRC3Q13489 604 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ODF2Q5BJF6 829 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ANO7Q6IWH7 933 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 RUFY4Q6ZNE9 571 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 G2E3Q7L622 706 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF572Q7Z3I7 529 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 FAM227BQ96M60 508 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 AGAP3Q96P47 875 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 IWS1Q96ST2 819 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 SAMSN1Q9NSI8 373 aaKnown RBP9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 LRRC42Q9Y546 428 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 DEPDC5O75140 1603 aa9.44□□□□□ -0.9
SRGAP1-202ENST00000537556 E7ENQ6 273 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 HIP1RO75146 1068 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 VIL1P09327 827 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 IDEP14735 1019 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 FXR1P51114 621 aaKnown RBP eCLIP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 LMNB2Q03252 620 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 ADAM9Q13443 819 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 CUL4BQ13620 913 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 BYSLQ13895 437 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 ITIH4Q14624 930 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 NDNQ99608 321 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC12A6Q9UHW9 1150 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 PREX2Q70Z35 1606 aa9.43□□□□□ -0.9
SRGAP1-202ENST00000537556 FAM237AA0A1B0GTK4 181 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms