RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SCNN1DP51172 638 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 INF2Q27J81 1249 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 ASPRV1Q53RT3 343 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 VSTM4Q8IW00 320 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 ZNF713Q8N859 430 aaPredicted RBP17.77■□□□□ 0.44
MKS1-204ENST00000537529 ZNF622Q969S3 477 aaKnown RBP eCLIP17.77■□□□□ 0.448e-7■■■□□ 15.6
MKS1-204ENST00000537529 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
MKS1-204ENST00000537529 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.43
MKS1-204ENST00000537529 IGKV6D-41A0A0C4DH26 115 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 USP17L5A8MUK1 530 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 HLA-DOAP06340 250 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 ZNF18P17022 549 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
MKS1-204ENST00000537529 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 DTHD1Q6ZMT9 781 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 C2CD5Q86YS7 1000 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
MKS1-204ENST00000537529 MXD3Q9BW11 206 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 CPVLQ9H3G5 476 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
MKS1-204ENST00000537529 PDHBP11177 359 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 TNNT1P13805 278 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 AKR1B1P15121 316 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 GTF2F1P35269 517 aaKnown RBP eCLIP17.76■□□□□ 0.43
MKS1-204ENST00000537529 KCNJ6P48051 423 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 STYK1Q6J9G0 422 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 CDC42EP5Q6NZY7 148 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 AEBP2Q6ZN18 517 aaPredicted RBP17.76■□□□□ 0.43
MKS1-204ENST00000537529 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
MKS1-204ENST00000537529 ESYT2A0FGR8 921 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 SMCO2A6NFE2 343 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 PRPHP41219 470 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
MKS1-204ENST00000537529 RIOX1Q9H6W3 641 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 CCAR2Q8N163 923 aaKnown RBP17.75■□□□□ 0.43
MKS1-204ENST00000537529 CCDC112Q8NEF3 446 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 PIGSQ96S52 555 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 RMND1Q9NWS8 449 aa17.75■□□□□ 0.43
MKS1-204ENST00000537529 H0YIN7 160 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 TTLL1O95922 423 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 CASP1P29466 404 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 STAT6P42226 847 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 CRKP46108 304 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 FKBP1AP62942 108 aaKnown RBP17.74■□□□□ 0.43
MKS1-204ENST00000537529 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 SPATA1Q5VX52 437 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
MKS1-204ENST00000537529 LRRC47Q8N1G4 583 aaKnown RBP17.74■□□□□ 0.43
MKS1-204ENST00000537529 VAT1LQ9HCJ6 419 aa17.74■□□□□ 0.43
MKS1-204ENST00000537529 SNHG28P0DPA3 235 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 CUL4BQ13620 913 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 ZDHHC15Q96MV8 337 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 EHD4Q9H223 541 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 TMEM60Q9H2L4 133 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 FRMPD2Q68DX3 1309 aaPredicted RBP17.73■□□□□ 0.43
MKS1-204ENST00000537529 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 SHMT1P34896 483 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 ORC2Q13416 577 aaPredicted RBP17.73■□□□□ 0.43
MKS1-204ENST00000537529 MED15Q96RN5 788 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 MRIQ9BWK5 157 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 INTS13Q9NVM9 706 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
MKS1-204ENST00000537529 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
MKS1-204ENST00000537529 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 ADAMTSL1Q8N6G6 1762 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 USP27XA6NNY8 438 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
MKS1-204ENST00000537529 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 HSP90AA4PQ58FG1 418 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 STRIP1Q5VSL9 837 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 KLHL10Q6JEL2 608 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
MKS1-204ENST00000537529 RASSF8Q8NHQ8 419 aa17.72■□□□□ 0.43
MKS1-204ENST00000537529 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 RIOK3O14730 519 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 OR52Z1P0C646 297 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 UBA7P41226 1012 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 KARSQ15046 597 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 CEP135Q66GS9 1140 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 NYAP1Q6ZVC0 841 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 NEK8Q86SG6 692 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 STAMQ92783 540 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 AK8Q96MA6 479 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 CCSER1Q9C0I3 900 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 SAMSN1Q9NSI8 373 aaKnown RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 PSDA5PKW4 1024 aaPredicted RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 KIF2AO00139 706 aaPredicted RBP17.71■□□□□ 0.43
MKS1-204ENST00000537529 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
MKS1-204ENST00000537529 PPP1R18Q6NYC8 613 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms