RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
USP44-203ENST00000537435 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
USP44-203ENST00000537435 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 M0R2N6 131 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 SASH3O75995 380 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 GRM4Q14833 912 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 SPTY2D1Q68D10 685 aaPredicted RBP16.15■□□□□ 0.18
USP44-203ENST00000537435 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
USP44-203ENST00000537435 CDC23Q9UJX2 597 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
USP44-203ENST00000537435 RGL2O15211 777 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 CHMP4BP1P59074 171 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 TRIM14Q14142 442 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 NAALADL2Q58DX5 795 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 TMED8Q6PL24 325 aaPredicted RBP16.14■□□□□ 0.18
USP44-203ENST00000537435 SRGAP1Q7Z6B7 1085 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 RASSF8Q8NHQ8 419 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 MAD2L2Q9UI95 211 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 PCDHA6Q9UN73 950 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 MTMR7Q9Y216 660 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 PCDHA8Q9Y5H6 950 aa16.14■□□□□ 0.18
USP44-203ENST00000537435 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 USP17L3A6NCW0 530 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 USP17L4A6NCW7 530 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 TRIM49BA6NDI0 452 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 PP2D1A8MPX8 630 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 GNAQP50148 359 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 SLC35G1Q2M3R5 365 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 CYP26C1Q6V0L0 522 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 USP17L1Q7RTZ2 530 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 SLC35F6Q8N357 371 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
USP44-203ENST00000537435 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
USP44-203ENST00000537435 H7C1D1 291 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 ABL1P00519 1130 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 KRT9P35527 623 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 UBXN1Q04323 297 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 INF2Q27J81 1249 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 TPTE2Q6XPS3 522 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 SH3RF3Q8TEJ3 882 aaPredicted RBP16.13■□□□□ 0.17
USP44-203ENST00000537435 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 CYTH3O43739 400 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 LDHBP07195 334 aaKnown RBP16.13■□□□□ 0.17
USP44-203ENST00000537435 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
USP44-203ENST00000537435 TM4SF1P30408 202 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 PLIN2Q99541 437 aa16.13■□□□□ 0.17
USP44-203ENST00000537435 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 ZPR1O75312 459 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 FAM193AP78312 1265 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 UBA7P41226 1012 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 PMS1P54277 932 aaKnown RBP16.12■□□□□ 0.17
USP44-203ENST00000537435 PTF1AQ7RTS3 328 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 DAGLBQ8NCG7 672 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 SLC44A5Q8NCS7 719 aa16.12■□□□□ 0.17
USP44-203ENST00000537435 STXBP3O00186 592 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 POLR3GO15318 223 aaPredicted RBP16.11■□□□□ 0.17
USP44-203ENST00000537435 ARHGAP25P42331 645 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 NT5C2P49902 561 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 KCNB1Q14721 858 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 DIXDC1Q155Q3 683 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 FAM98CQ17RN3 349 aaKnown RBP16.11■□□□□ 0.17
USP44-203ENST00000537435 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 SLC51AQ86UW1 340 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
USP44-203ENST00000537435 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 UBXN6Q9BZV1 441 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 MAST2Q6P0Q8 1798 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 GNPATO15228 680 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 KLRC4O43908 158 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 TUBB2AQ13885 445 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 CHP1Q99653 195 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 NAPGQ99747 312 aaPredicted RBP16.11■□□□□ 0.17
USP44-203ENST00000537435 TUBB2BQ9BVA1 445 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 CCSER1Q9C0I3 900 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
USP44-203ENST00000537435 CCDC151A5D8V7 595 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 GRIK5Q16478 980 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
USP44-203ENST00000537435 FUT8Q9BYC5 575 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms