RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 FUT2Q10981 343 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 SLC35G1Q2M3R5 365 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 ANKRD23Q86SG2 305 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 FAM160B2Q86V87 743 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 WDR33Q9C0J8 1336 aaKnown RBP28.18■■■□□ 2.1
HMGA2-208ENST00000537429 CYTH3O43739 400 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 VEGFBP49765 207 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
HMGA2-208ENST00000537429 IKQ13123 557 aaPredicted RBP28.18■■■□□ 2.1
HMGA2-208ENST00000537429 PABPC4Q13310 644 aaKnown RBP eCLIP28.18■■■□□ 2.1
HMGA2-208ENST00000537429 CUL4AQ13619 759 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 SLC45A1Q9Y2W3 748 aa28.18■■■□□ 2.1
HMGA2-208ENST00000537429 CPLX1O14810 134 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 FLOT1O75955 427 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 IFNAR1P17181 557 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 ANP32AP39687 249 aaKnown RBP28.17■■■□□ 2.1
HMGA2-208ENST00000537429 SREBF2Q12772 1141 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 SAMD1Q6SPF0 538 aaPredicted RBP28.17■■■□□ 2.1
HMGA2-208ENST00000537429 CCDC82Q8N4S0 544 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 SPZ1Q9BXG8 430 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 RIOX1Q9H6W3 641 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 PARP14Q460N5 1801 aa28.17■■■□□ 2.1
HMGA2-208ENST00000537429 RLFQ13129 1914 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 CTDNEP1O95476 244 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 TM4SF4P48230 202 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 COG2Q14746 738 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 CPLX2Q6PUV4 134 aaKnown RBP28.16■■■□□ 2.1
HMGA2-208ENST00000537429 FAM43AQ8N2R8 423 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 PRPF38AQ8NAV1 312 aaKnown RBP28.16■■■□□ 2.1
HMGA2-208ENST00000537429 SLF1Q9BQI6 1058 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 PPP1R9AQ9ULJ8 1098 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 PRR12Q9ULL5 1215 aa28.16■■■□□ 2.1
HMGA2-208ENST00000537429 BECN1Q14457 450 aa28.15■■■□□ 2.1
HMGA2-208ENST00000537429 SYDE2Q5VT97 1194 aa28.15■■■□□ 2.1
HMGA2-208ENST00000537429 ADGRF4Q8IZF3 695 aa28.15■■■□□ 2.1
HMGA2-208ENST00000537429 PDHXO00330 501 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 IGF2BP3O00425 579 aaKnown RBP eCLIP28.14■■■□□ 2.13e-6■■■□□ 17.3
HMGA2-208ENST00000537429 DSG3P32926 999 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 MYPNQ86TC9 1320 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 CNTNAP5Q8WYK1 1306 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 KIFC2Q96AC6 838 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 LLPHQ9BRT6 129 aaKnown RBP28.14■■■□□ 2.1
HMGA2-208ENST00000537429 ASCC2Q9H1I8 757 aaPredicted RBP28.14■■■□□ 2.1
HMGA2-208ENST00000537429 JMJD4Q9H9V9 463 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 HOXC10Q9NYD6 342 aa28.14■■■□□ 2.1
HMGA2-208ENST00000537429 OSBPP22059 807 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 IRX3P78415 501 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-208ENST00000537429 NSUN7Q8NE18 718 aaKnown RBP28.13■■■□□ 2.09
HMGA2-208ENST00000537429 ZCCHC17Q9NP64 241 aaKnown RBP28.13■■■□□ 2.09
HMGA2-208ENST00000537429 CDKL5O76039 1030 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 IFNL1Q8IU54 200 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 PHKBQ93100 1093 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 MTMR8Q96EF0 704 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 VAT1LQ9HCJ6 419 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 PNMA3Q9UL41 463 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 ADAMTS5Q9UNA0 930 aa28.13■■■□□ 2.09
HMGA2-208ENST00000537429 MAP2K2P36507 400 aa28.12■■■□□ 2.09
HMGA2-208ENST00000537429 OTUD7BQ6GQQ9 843 aa28.12■■■□□ 2.09
HMGA2-208ENST00000537429 REM2Q8IYK8 340 aaPredicted RBP28.12■■■□□ 2.09
HMGA2-208ENST00000537429 P2RX7Q99572 595 aaKnown RBP28.12■■■□□ 2.09
HMGA2-208ENST00000537429 RNF26Q9BY78 433 aaPredicted RBP28.12■■■□□ 2.09
HMGA2-208ENST00000537429 SPDYE16A6NNV3 312 aaPredicted RBP28.11■■■□□ 2.09
HMGA2-208ENST00000537429 DTNBO60941 627 aa28.11■■■□□ 2.09
HMGA2-208ENST00000537429 SMARCC2Q8TAQ2 1214 aa28.11■■■□□ 2.09
HMGA2-208ENST00000537429 ATG4CQ96DT6 458 aa28.11■■■□□ 2.09
HMGA2-208ENST00000537429 BAZ2BQ9UIF8 2168 aaKnown RBP28.11■■■□□ 2.09
HMGA2-208ENST00000537429 PRPF3O43395 683 aaKnown RBP28.1■■■□□ 2.09
HMGA2-208ENST00000537429 PPFIA3O75145 1194 aa28.1■■■□□ 2.09
HMGA2-208ENST00000537429 FMNL1O95466 1100 aaPredicted RBP28.1■■■□□ 2.09
HMGA2-208ENST00000537429 FDX1P10109 184 aa28.1■■■□□ 2.09
HMGA2-208ENST00000537429 HERVK_113P62684 666 aa28.1■■■□□ 2.09
HMGA2-208ENST00000537429 LBX2Q6XYB7 198 aa28.1■■■□□ 2.09
HMGA2-208ENST00000537429 INTS4Q96HW7 963 aaKnown RBP28.1■■■□□ 2.09
HMGA2-208ENST00000537429 SLC26A6Q9BXS9 759 aa28.1■■■□□ 2.09
HMGA2-208ENST00000537429 RANBP17Q9H2T7 1088 aaKnown RBP28.1■■■□□ 2.09
HMGA2-208ENST00000537429 V9GY48 417 aaPredicted RBP28.1■■■□□ 2.09
HMGA2-208ENST00000537429 PTPDC1A2A3K4 754 aa28.09■■■□□ 2.09
HMGA2-208ENST00000537429 VWA5AO00534 786 aa28.09■■■□□ 2.09
HMGA2-208ENST00000537429 JAK2O60674 1132 aa28.09■■■□□ 2.09
HMGA2-208ENST00000537429 SSRP1Q08945 709 aaKnown RBP28.09■■■□□ 2.09
HMGA2-208ENST00000537429 PIGSQ96S52 555 aa28.09■■■□□ 2.09
HMGA2-208ENST00000537429 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.09■■■□□ 2.09
HMGA2-208ENST00000537429 CYP2C8P10632 490 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 POTEEQ6S8J3 1075 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 TRIM22Q8IYM9 498 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 RRP36Q96EU6 259 aaKnown RBP28.08■■■□□ 2.09
HMGA2-208ENST00000537429 SLC38A10Q9HBR0 1119 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 STK36Q9NRP7 1315 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 THSD7BQ9C0I4 1608 aa28.08■■■□□ 2.09
HMGA2-208ENST00000537429 SNAP25P60880 206 aa28.08■■■□□ 2.08
HMGA2-208ENST00000537429 HOMER1Q86YM7 354 aa28.08■■■□□ 2.08
HMGA2-208ENST00000537429 PIBF1Q8WXW3 757 aa28.08■■■□□ 2.08
HMGA2-208ENST00000537429 RBM27Q9P2N5 1060 aaKnown RBP28.08■■■□□ 2.08
HMGA2-208ENST00000537429 hCG_1642624A0A1W2PR95 340 aa28.07■■■□□ 2.08
HMGA2-208ENST00000537429 ZBTB5O15062 677 aa28.07■■■□□ 2.08
HMGA2-208ENST00000537429 FDPSP14324 419 aaKnown RBP28.07■■■□□ 2.08
HMGA2-208ENST00000537429 CDC37Q16543 378 aaPredicted RBP28.07■■■□□ 2.08
HMGA2-208ENST00000537429 REPS2Q8NFH8 660 aa28.07■■■□□ 2.08
HMGA2-208ENST00000537429 PARK7Q99497 189 aaKnown RBP28.07■■■□□ 2.08
HMGA2-208ENST00000537429 A0A0G2JMZ2 1700 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms