RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 DPP9Q86TI2 863 aa21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 ABRAQ8N0Z2 381 aa21.12■□□□□ 0.97
TNFRSF1A-209ENST00000536717 BMP3P12645 472 aa21.11■□□□□ 0.97
TNFRSF1A-209ENST00000536717 RASGRP2Q7LDG7 609 aa21.11■□□□□ 0.97
TNFRSF1A-209ENST00000536717 STAG1Q8WVM7 1258 aa21.11■□□□□ 0.97
TNFRSF1A-209ENST00000536717 FEM1BQ9UK73 627 aa21.11■□□□□ 0.97
TNFRSF1A-209ENST00000536717 MCM3APO60318 1980 aa21.11■□□□□ 0.97
TNFRSF1A-209ENST00000536717 PCP11498 1178 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 KIFC2Q96AC6 838 aa21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 GMCL1Q96IK5 515 aa21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 DSCC1Q9BVC3 393 aa21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 RIPK3Q9Y572 518 aa21.1■□□□□ 0.97
TNFRSF1A-209ENST00000536717 NEDD4P46934 1319 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 FCER1AP12319 257 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 MCCP23508 829 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 CYP2C19P33261 490 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 MFSD14CQ5VZR4 134 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 CHMP4CQ96CF2 233 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TEX13BQ9BXU2 312 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 SLC38A10Q9HBR0 1119 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TCP11L1Q9NUJ3 509 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 OGDHLQ9ULD0 1010 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 TMEM232C9JQI7 657 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 ZNF213O14771 459 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 ATP2A1O14983 1001 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 SLC1A4P43007 532 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 MNX1P50219 401 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 OLFML2BQ68BL8 750 aa21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 SNRNP48Q6IEG0 339 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 DIS3LQ8TF46 1054 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-209ENST00000536717 COPB2P35606 906 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 STAT2P52630 851 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 LHX8Q68G74 356 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CPXCR1Q8N123 301 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ANKLE1Q8NAG6 615 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 PAWRQ96IZ0 340 aaKnown RBP21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 MMP19Q99542 508 aa21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RNF41Q9H4P4 317 aaPredicted RBP21.08■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DNAH12Q6ZR08 3092 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ZBED4O75132 1171 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RCSD1Q6JBY9 416 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 KCTD1Q719H9 257 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 TRPV1Q8NER1 839 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 MAML3Q96JK9 1138 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RAVER2Q9HCJ3 691 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 SLC5A4Q9NY91 659 aa21.07■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RAD50Q92878 1312 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 PLA2G6O60733 806 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 PGK2P07205 417 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CYBAP13498 195 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CHMLP26374 656 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 FAM160B2Q86V87 743 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CHURC1Q8WUH1 139 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 MTMR7Q9Y216 660 aa21.06■□□□□ 0.96
TNFRSF1A-209ENST00000536717 TOP1P11387 765 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-209ENST00000536717 OAZ1P54368 228 aa21.05■□□□□ 0.96
TNFRSF1A-209ENST00000536717 KCTD2Q14681 263 aa21.05■□□□□ 0.96
TNFRSF1A-209ENST00000536717 BMP2KLQ5H9B9 411 aa21.05■□□□□ 0.96
TNFRSF1A-209ENST00000536717 HTATIP2Q9BUP3 242 aa21.05■□□□□ 0.96
TNFRSF1A-209ENST00000536717 FDX1P10109 184 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ZNF792Q3KQV3 632 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 NECAB2Q7Z6G3 386 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ESR2Q92731 530 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DPF3Q92784 378 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CTDP1Q9Y5B0 961 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ZNF536O15090 1300 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 SLC4A3P48751 1232 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 IMMTQ16891 758 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DCAF4Q8WV16 495 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 TTC14Q96N46 770 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DDX20Q9UHI6 824 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CTNNA3Q9UI47 895 aa21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DIS3Q9Y2L1 958 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-209ENST00000536717 MYH6P13533 1939 aa21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CNGA1P29973 690 aa21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 IKQ13123 557 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 ZKSCAN3Q9BRR0 538 aa21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 PRR12Q9ULL5 1215 aa21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 LCTP09848 1927 aa21.03■□□□□ 0.96
TNFRSF1A-209ENST00000536717 DNAJC25-GNG10A0A024R161 153 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 B4E1Z4 1266 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 KDM4AO75164 1064 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 CCDC96Q2M329 555 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 PRAMEF19Q5SWL8 479 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
TNFRSF1A-209ENST00000536717 RANBP2P49792 3224 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 H0YGN5 161 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 MSCO60682 206 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 PDHBP11177 359 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 NT5C2P49902 561 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 PTH1RQ03431 593 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TTBK2Q6IQ55 1244 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 CHST13Q8NET6 341 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 AGBL1Q96MI9 1066 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
TNFRSF1A-209ENST00000536717 PFASO15067 1338 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms