RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 NBPF9Q3BBW0 867 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 PPFIBP1Q86W92 1011 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 CTCFLQ8NI51 663 aaPredicted RBP8.81□□□□□ -1
CPSF7-216ENST00000536548 KLHDC4Q8TBB5 520 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 XAGE3Q8WTP9 111 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 WASF1Q92558 559 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 TRERF1Q96PN7 1200 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 HSD3B7Q9H2F3 369 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 MYOZ2Q9NPC6 264 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
CPSF7-216ENST00000536548 FANCLQ9NW38 375 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 RAI14Q9P0K7 980 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 RSPH14Q9UHP6 348 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 ZMYM6O95789 1325 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 DDX60Q8IY21 1712 aaKnown RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 A0A1W2PPC1 479 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 MANSC4A6NHS7 340 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 SEMA3EO15041 775 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 WDHD1O75717 1129 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 MAGEA9P43362 315 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 INHBEP58166 350 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 TRDNQ13061 729 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 TTC31Q49AM3 519 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 MAP9Q49MG5 647 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 FILIP1LQ4L180 1135 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 EPHA10Q5JZY3 1008 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 SLC10A5Q5PT55 438 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 TTC39AQ5SRH9 613 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 LDLRAD1Q5T700 205 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 COPS6Q7L5N1 327 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 UBE2Q1Q7Z7E8 422 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 FAM177A1Q8N128 213 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 PIAS4Q8N2W9 510 aaPredicted RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 KRI1Q8N9T8 703 aaKnown RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 TC2NQ8N9U0 490 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 DHX58Q96C10 678 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 NEUROD6Q96NK8 337 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 CTAGE1Q96RT6 745 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 WDR24Q96S15 920 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 PTPN18Q99952 460 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 ALG1Q9BT22 464 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 KCNH3Q9ULD8 1083 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 TTF2Q9UNY4 1162 aaKnown RBP8.8□□□□□ -1
CPSF7-216ENST00000536548 COL4A1P02462 1669 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 STK36Q9NRP7 1315 aa8.8□□□□□ -1
CPSF7-216ENST00000536548 LAMB1P07942 1786 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 CTAGE9A4FU28 777 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 TMEM232C9JQI7 657 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 ZNF213O14771 459 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 CIAO1O76071 339 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 MYL6BP14649 208 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 MARCKSP29966 332 aaPredicted RBP8.79□□□□□ -1
CPSF7-216ENST00000536548 IRX3P78415 501 aaPredicted RBP8.79□□□□□ -1
CPSF7-216ENST00000536548 GPSM2P81274 684 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 PNOCQ13519 176 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 GRAPQ13588 217 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 PTPAQ15257 358 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 SAFBQ15424 915 aaKnown RBP eCLIP8.79□□□□□ -1
CPSF7-216ENST00000536548 BEND6Q5SZJ8 279 aaPredicted RBP8.79□□□□□ -1
CPSF7-216ENST00000536548 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 OTUD7BQ6GQQ9 843 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 SHC4Q6S5L8 630 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 KIF6Q6ZMV9 814 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 UBE3BQ7Z3V4 1068 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 VPS37DQ86XT2 251 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 C10orf67Q8IYJ2 551 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 GRAPLQ8TC17 118 aaPredicted RBP8.79□□□□□ -1
CPSF7-216ENST00000536548 PPM1EQ8WY54 764 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 VIPAS39Q9H9C1 493 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 VPS18Q9P253 973 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 FBXO3Q9UK99 471 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 ANGEL1Q9UNK9 670 aaKnown RBP8.79□□□□□ -1
CPSF7-216ENST00000536548 CEP131Q9UPN4 1083 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 PCDHA5Q9Y5H7 936 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 NR2E3Q9Y5X4 410 aa8.79□□□□□ -1
CPSF7-216ENST00000536548 CTAGE15A4D2H0 777 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 KIF28PB7ZC32 967 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 H3BQF6 201 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 FANCGO15287 622 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 USP17L8P0C7I0 530 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 CTAGE8P0CG41 777 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ZNF18P17022 549 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 METAP2P50579 478 aaKnown RBP eCLIP8.78□□□□□ -1
CPSF7-216ENST00000536548 PLCD1P51178 756 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 TRIM14Q14142 442 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 KARSQ15046 597 aaKnown RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 POSTNQ15063 836 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 KRT40Q6A162 431 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ISM2Q6H9L7 571 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 RSBN1LQ6PCB5 846 aaPredicted RBP8.78□□□□□ -1
CPSF7-216ENST00000536548 TOGARAM2Q6ZUX3 1019 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 ARMC9Q7Z3E5 817 aa8.78□□□□□ -1
CPSF7-216ENST00000536548 CTAGE6Q86UF2 777 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms