RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 SHHQ15465 462 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 PRAMEF19Q5SWL8 479 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMO3-214ENST00000536509 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 BADQ92934 168 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
LMO3-214ENST00000536509 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
LMO3-214ENST00000536509 LAMA2P24043 3122 aaKnown RBP13.31□□□□□ -0.28
LMO3-214ENST00000536509 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 CLTBP09497 229 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 AKR1A1P14550 325 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 GIMAP6Q6P9H5 292 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 CLEC10AQ8IUN9 316 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 SIRT2Q8IXJ6 389 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 ZNF214Q9UL59 606 aaPredicted RBP13.31□□□□□ -0.28
LMO3-214ENST00000536509 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
LMO3-214ENST00000536509 PPP1R37O75864 691 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 TLE2Q04725 743 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 FERMT2Q96AC1 680 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 SYNGAP1Q96PV0 1343 aa13.3□□□□□ -0.28
LMO3-214ENST00000536509 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 HAX1O00165 279 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 ATP2A1O14983 1001 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 PGK2P07205 417 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
LMO3-214ENST00000536509 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
LMO3-214ENST00000536509 FAM161BQ96MY7 647 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 CDX2Q99626 313 aaPredicted RBP13.29□□□□□ -0.28
LMO3-214ENST00000536509 SLF1Q9BQI6 1058 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 NYAP2Q9P242 653 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 SYNPO2Q9UMS6 1093 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 CUL9Q8IWT3 2517 aa13.29□□□□□ -0.28
LMO3-214ENST00000536509 UNC80Q8N2C7 3258 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
LMO3-214ENST00000536509 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 DCDC2CA8MYV0 355 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 RAD21O60216 631 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
LMO3-214ENST00000536509 RAG1P15918 1043 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 MAMDC4Q6UXC1 1216 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.28□□□□□ -0.28
LMO3-214ENST00000536509 ANKRD33Q7Z3H0 272 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 SH3RF1Q7Z6J0 888 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 DDX11Q96FC9 970 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 COL25A1Q9BXS0 654 aaPredicted RBP13.28□□□□□ -0.28
LMO3-214ENST00000536509 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
LMO3-214ENST00000536509 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 FAM184BQ9ULE4 1060 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 MROH7Q68CQ1 1323 aa13.28□□□□□ -0.28
LMO3-214ENST00000536509 ADAMTS4O75173 837 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 PGK1P00558 417 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 ZFYP08048 801 aaPredicted RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 FDX1P10109 184 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 GNAT2P19087 354 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 FPGSQ05932 587 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 SLFNL1Q499Z3 407 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 STRBPQ96SI9 672 aaKnown RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 ECHDC1Q9NTX5 307 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 TMEM39AQ9NV64 488 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
LMO3-214ENST00000536509 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
LMO3-214ENST00000536509 DNAJC25-GNG10A0A024R161 153 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 F5H6K3 240 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 PQBP1O60828 265 aaKnown RBP13.26□□□□□ -0.29
LMO3-214ENST00000536509 ZBED4O75132 1171 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 DUSP11O75319 330 aaKnown RBP13.26□□□□□ -0.29
LMO3-214ENST00000536509 ELP1O95163 1332 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 RASA1P20936 1047 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 CST5P28325 142 aaPredicted RBP13.26□□□□□ -0.29
LMO3-214ENST00000536509 ACLYP53396 1101 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 OAZ1P54368 228 aa13.26□□□□□ -0.29
LMO3-214ENST00000536509 KLRC3Q07444 240 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms