RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 RMND1Q9NWS8 449 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 ZBTB22O15209 634 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 RPN1P04843 607 aaKnown RBP14.87□□□□□ -0.03
LDLR-203ENST00000535915 LDHCP07864 332 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 CCDC175P0C221 793 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 PAK1Q13153 545 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 ZNF658Q5TYW1 1059 aaPredicted RBP14.87□□□□□ -0.03
LDLR-203ENST00000535915 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 DTHD1Q6ZMT9 781 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 CCDC148Q8NFR7 591 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 RWDD2AQ9UIY3 292 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 LY75O60449 1722 aa14.87□□□□□ -0.03
LDLR-203ENST00000535915 TOM1O60784 492 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 PPP4CP60510 307 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 NAA15Q9BXJ9 866 aaKnown RBP14.86□□□□□ -0.03
LDLR-203ENST00000535915 TCP11L1Q9NUJ3 509 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 PCDHA6Q9UN73 950 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 PCDHA8Q9Y5H6 950 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 CYTH3O43739 400 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 H2AFXP16104 143 aaPredicted RBP14.86□□□□□ -0.03
LDLR-203ENST00000535915 CASP14P31944 242 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 KRT31Q15323 416 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 INF2Q27J81 1249 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 NELFBQ8WX92 580 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 MAPK8IP1Q9UQF2 711 aa14.86□□□□□ -0.03
LDLR-203ENST00000535915 M0R2N6 131 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 N4BP3O15049 544 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 IGSF3O75054 1194 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 MFAP3LO75121 409 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 TPM1P09493 284 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 GOLGA8HP0CJ92 632 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 VPS16Q9H269 839 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 MRPL44Q9H9J2 332 aaKnown RBP14.85□□□□□ -0.03
LDLR-203ENST00000535915 DISC1Q9NRI5 854 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 RASA1P20936 1047 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 ANKRD20A12PQ8NF67 263 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 LIMA1Q9UHB6 759 aaKnown RBP14.85□□□□□ -0.03
LDLR-203ENST00000535915 GDAQ9Y2T3 454 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 PP2D1A8MPX8 630 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 EFCAB8A8MWE9 144 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 STXBP3O00186 592 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 RAD9BQ6WBX8 426 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 RPGRQ92834 1020 aaKnown RBP14.85□□□□□ -0.03
LDLR-203ENST00000535915 RTFDC1Q9BY42 306 aaPredicted RBP14.85□□□□□ -0.03
LDLR-203ENST00000535915 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 ZNF287Q9HBT7 754 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 ZNF446Q9NWS9 450 aa14.85□□□□□ -0.03
LDLR-203ENST00000535915 ITIH6Q6UXX5 1313 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 TADA3O75528 432 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 GYPCP04921 128 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 UBA7P41226 1012 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 PRCPP42785 496 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 BTDP43251 543 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 MAP3K9P80192 1104 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 SPAG1Q07617 926 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 FAM196AQ6ZSG2 479 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 DAGLBQ8NCG7 672 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
LDLR-203ENST00000535915 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
LDLR-203ENST00000535915 KCNJ18B7U540 433 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 KLRF2D3W0D1 207 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 FXR1P51114 621 aaKnown RBP eCLIP14.84□□□□□ -0.03
LDLR-203ENST00000535915 CLCN6P51797 869 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 COPB1P53618 953 aaKnown RBP14.84□□□□□ -0.03
LDLR-203ENST00000535915 GPSM2P81274 684 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 KCNJ12Q14500 433 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 TCP11X2Q5H9J9 407 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 TAF3Q5VWG9 929 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 CCDC12Q8WUD4 166 aaPredicted RBP14.84□□□□□ -0.03
LDLR-203ENST00000535915 KIFC2Q96AC6 838 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 TAB2Q9NYJ8 693 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 ADGRG1Q9Y653 693 aa14.84□□□□□ -0.03
LDLR-203ENST00000535915 UFL1O94874 794 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 RASGRP2Q7LDG7 609 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 PLIN2Q99541 437 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 IRX2Q9BZI1 471 aaPredicted RBP14.83□□□□□ -0.04
LDLR-203ENST00000535915 CPVLQ9H3G5 476 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 LRRC10BA6NIK2 292 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 CDK8P49336 464 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 NAALADL2Q58DX5 795 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 TEX11Q8IYF3 940 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 CCDC51Q96ER9 411 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 EYA3Q99504 573 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 LZTS2Q9BRK4 669 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 CD209Q9NNX6 404 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 ARGLU1Q9NWB6 273 aaPredicted RBP14.83□□□□□ -0.04
LDLR-203ENST00000535915 USP21Q9UK80 565 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 MRFAP1Q9Y605 127 aa14.83□□□□□ -0.04
LDLR-203ENST00000535915 NAPAP54920 295 aa14.82□□□□□ -0.04
LDLR-203ENST00000535915 PPP2R3AQ06190 1150 aa14.82□□□□□ -0.04
LDLR-203ENST00000535915 PRR5LQ6MZQ0 368 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms