RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TRPV1Q8NER1 839 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 DIS3LQ8TF46 1054 aaKnown RBP19.38■□□□□ 0.69
ATL3-202ENST00000535789 RAD50Q92878 1312 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 GMCL1Q96IK5 515 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 MROH8Q9H579 483 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 SLC38A10Q9HBR0 1119 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 CWC22Q9HCG8 908 aaKnown RBP19.38■□□□□ 0.69
ATL3-202ENST00000535789 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
ATL3-202ENST00000535789 RANBP2P49792 3224 aaKnown RBP19.38■□□□□ 0.69
ATL3-202ENST00000535789 ZNF536O15090 1300 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 MCCP23508 829 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 STAT3P40763 770 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 PTH1RQ03431 593 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 PRPF38AQ8NAV1 312 aaKnown RBP19.37■□□□□ 0.69
ATL3-202ENST00000535789 KIFC2Q96AC6 838 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 HMX1Q9NP08 348 aaPredicted RBP19.37■□□□□ 0.69
ATL3-202ENST00000535789 TCP11L1Q9NUJ3 509 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 TAF6LQ9Y6J9 622 aa19.37■□□□□ 0.69
ATL3-202ENST00000535789 TMEM232C9JQI7 657 aa19.36■□□□□ 0.69
ATL3-202ENST00000535789 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
ATL3-202ENST00000535789 SLC25A27O95847 323 aa19.36■□□□□ 0.69
ATL3-202ENST00000535789 TAL1P17542 331 aaPredicted RBP19.36■□□□□ 0.69
ATL3-202ENST00000535789 CYP2C19P33261 490 aa19.36■□□□□ 0.69
ATL3-202ENST00000535789 SNRNP48Q6IEG0 339 aaKnown RBP19.36■□□□□ 0.69
ATL3-202ENST00000535789 MFSD6Q6ZSS7 791 aa19.36■□□□□ 0.69
ATL3-202ENST00000535789 TRMT44Q8IYL2 757 aaKnown RBP19.36■□□□□ 0.69
ATL3-202ENST00000535789 FEM1BQ9UK73 627 aa19.36■□□□□ 0.69
ATL3-202ENST00000535789 ATP2A1O14983 1001 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 STRNO43815 780 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 PGK2P07205 417 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 CYBAP13498 195 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 PRPF38BQ5VTL8 546 aaKnown RBP19.35■□□□□ 0.69
ATL3-202ENST00000535789 LHX8Q68G74 356 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 ZKSCAN3Q9BRR0 538 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 TEX13BQ9BXU2 312 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 RAVER2Q9HCJ3 691 aaKnown RBP19.35■□□□□ 0.69
ATL3-202ENST00000535789 MTMR7Q9Y216 660 aa19.35■□□□□ 0.69
ATL3-202ENST00000535789 B4E1Z4 1266 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 ZNF213O14771 459 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 PCP11498 1178 aaKnown RBP19.34■□□□□ 0.69
ATL3-202ENST00000535789 SLC1A4P43007 532 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 SNAP25P60880 206 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 OLFML2BQ68BL8 750 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
ATL3-202ENST00000535789 CPXCR1Q8N123 301 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 MAML3Q96JK9 1138 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 OGDHLQ9ULD0 1010 aa19.34■□□□□ 0.69
ATL3-202ENST00000535789 SGSM2O43147 1006 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 KDM4AO75164 1064 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 FCER1AP12319 257 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 STAT2P52630 851 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 ZNF792Q3KQV3 632 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 TTBK2Q6IQ55 1244 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATL3-202ENST00000535789 DPP9Q86TI2 863 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 FGD4Q96M96 766 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 MMP19Q99542 508 aa19.33■□□□□ 0.68
ATL3-202ENST00000535789 FRMPD2Q68DX3 1309 aaPredicted RBP19.32■□□□□ 0.68
ATL3-202ENST00000535789 PLA2G6O60733 806 aa19.32■□□□□ 0.68
ATL3-202ENST00000535789 TFRCP02786 760 aaKnown RBP19.32■□□□□ 0.68
ATL3-202ENST00000535789 PDHBP11177 359 aa19.32■□□□□ 0.68
ATL3-202ENST00000535789 TOP1P11387 765 aaKnown RBP19.32■□□□□ 0.68
ATL3-202ENST00000535789 PPP4R3BQ5MIZ7 849 aa19.32■□□□□ 0.68
ATL3-202ENST00000535789 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
ATL3-202ENST00000535789 PRR12Q9ULL5 1215 aa19.32■□□□□ 0.68
ATL3-202ENST00000535789 PFASO15067 1338 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 DNAJC25-GNG10A0A024R161 153 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 CYP21A2P08686 494 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 SNHG28P0DPA3 235 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 IMMTQ16891 758 aaKnown RBP19.31■□□□□ 0.68
ATL3-202ENST00000535789 MFSD14CQ5VZR4 134 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 FAM160B2Q86V87 743 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 DCAF4Q8WV16 495 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 ESR2Q92731 530 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 PAWRQ96IZ0 340 aaKnown RBP19.31■□□□□ 0.68
ATL3-202ENST00000535789 AGBL1Q96MI9 1066 aa19.31■□□□□ 0.68
ATL3-202ENST00000535789 BAZ2BQ9UIF8 2168 aaKnown RBP19.31■□□□□ 0.68
ATL3-202ENST00000535789 LTBP2Q14767 1821 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 ZBED4O75132 1171 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 COPB2P35606 906 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 SLC16A2P36021 539 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 OAZ1P54368 228 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 CCDC96Q2M329 555 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 PRAMEF19Q5SWL8 479 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 STOX1Q6ZVD7 989 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
ATL3-202ENST00000535789 ISY1Q9ULR0 285 aaKnown RBP19.3■□□□□ 0.68
ATL3-202ENST00000535789 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
ATL3-202ENST00000535789 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
ATL3-202ENST00000535789 ENAHQ8N8S7 591 aaPredicted RBP19.29■□□□□ 0.68
ATL3-202ENST00000535789 ANKLE1Q8NAG6 615 aa19.29■□□□□ 0.68
ATL3-202ENST00000535789 RANBP17Q9H2T7 1088 aaKnown RBP19.29■□□□□ 0.68
ATL3-202ENST00000535789 ZSWIM5Q9P217 1185 aa19.29■□□□□ 0.68
ATL3-202ENST00000535789 DDX20Q9UHI6 824 aaKnown RBP19.29■□□□□ 0.68
ATL3-202ENST00000535789 ASTN1O14525 1302 aa19.28■□□□□ 0.68
ATL3-202ENST00000535789 TNKSO95271 1327 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms