RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 WDR93Q6P2C0 686 aa15.05■□□□□ 0
HDAC4-214ENST00000535493 CATIPQ7Z7H3 387 aa15.05■□□□□ 0
HDAC4-214ENST00000535493 TMTC2Q8N394 836 aa15.05■□□□□ 0
HDAC4-214ENST00000535493 ANKRD20A12PQ8NF67 263 aa15.05■□□□□ 0
HDAC4-214ENST00000535493 SMARCC1Q92922 1105 aaPredicted RBP15.05■□□□□ 0
HDAC4-214ENST00000535493 HPS3Q969F9 1004 aa15.05■□□□□ 0
HDAC4-214ENST00000535493 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
HDAC4-214ENST00000535493 TROAPQ12815 778 aa15.05■□□□□ -0
HDAC4-214ENST00000535493 MB21D1Q8N884 522 aa15.05■□□□□ -0
HDAC4-214ENST00000535493 AGPSO00116 658 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 TRIM21P19474 475 aaKnown RBP15.04■□□□□ -0
HDAC4-214ENST00000535493 FECHP22830 423 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 EIF5P55010 431 aaKnown RBP15.04■□□□□ -0
HDAC4-214ENST00000535493 TRIM47Q96LD4 638 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 KAT14Q9H8E8 782 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 JAG2Q9Y219 1238 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 ZC3H4Q9UPT8 1303 aaKnown RBP15.04■□□□□ -0
HDAC4-214ENST00000535493 TNS3Q68CZ2 1445 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 SEMA3EO15041 775 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 IDEP14735 1019 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 STAT6P42226 847 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 CCT5P48643 541 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 ZNF658Q5TYW1 1059 aaPredicted RBP15.04■□□□□ -0
HDAC4-214ENST00000535493 COG1Q8WTW3 980 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 TNFRSF25Q93038 417 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 CRACR2AQ9BSW2 395 aa15.04■□□□□ -0
HDAC4-214ENST00000535493 DNA2P51530 1060 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 EVA1CP58658 441 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 TTC31Q49AM3 519 aaPredicted RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 ANKRD13CQ8N6S4 541 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 RNF41Q9H4P4 317 aaPredicted RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 MED4Q9NPJ6 270 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 DMGDHQ9UI17 866 aaKnown RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 PSMD14O00487 310 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 PRPF3O43395 683 aaKnown RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
HDAC4-214ENST00000535493 ZPR1O75312 459 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 TUBB2AQ13885 445 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 LRRC15Q8TF66 581 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 TUBB2BQ9BVA1 445 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 BRMS1Q9HCU9 246 aa15.03■□□□□ -0
HDAC4-214ENST00000535493 FAM205AQ6ZU69 1335 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 MAGEA9P43362 315 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 SUSD4Q5VX71 490 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 DZIP3Q86Y13 1208 aaKnown RBP15.02■□□□□ -0
HDAC4-214ENST00000535493 MICALL1Q8N3F8 863 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 HAUS4Q9H6D7 363 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 NHEJ1Q9H9Q4 299 aaPredicted RBP15.02■□□□□ -0
HDAC4-214ENST00000535493 MYO1AQ9UBC5 1043 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 MYH2Q9UKX2 1941 aa15.02■□□□□ -0
HDAC4-214ENST00000535493 CDHR2Q9BYE9 1310 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 RASSF10A6NK89 507 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 USP17L12C9JPN9 530 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 USP17L21D6R901 530 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 LIG3P49916 1009 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 ACBD3Q9H3P7 528 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 LRWD1Q9UFC0 647 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 SAMM50Q9Y512 469 aa15.02□□□□□ -0.01
HDAC4-214ENST00000535493 LRP6O75581 1613 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 ATP2B2Q01814 1243 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 NAALADL2Q58DX5 795 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 SND1Q7KZF4 910 aaKnown RBP eCLIP15.01□□□□□ -0.012e-7■■■■■ 27.5
HDAC4-214ENST00000535493 LRRC1Q9BTT6 524 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 TMEM60Q9H2L4 133 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 MLXIPQ9HAP2 919 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 ZNF263O14978 683 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 CYP2D6P10635 497 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 CORO7P57737 925 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 ADSSL1Q8N142 457 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 COL18A1P39060 1754 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 LGALS16A8MUM7 142 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 PPFIA4O75335 1185 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 GNAT2P19087 354 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 SPAG1Q07617 926 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 TBC1D8BQ0IIM8 1120 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 NKX1-1Q15270 411 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-214ENST00000535493 CCDC96Q2M329 555 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 CCNI2Q6ZMN8 369 aaPredicted RBP15.01□□□□□ -0.01
HDAC4-214ENST00000535493 IQCA1Q86XH1 822 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 ZNF507Q8TCN5 953 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 DNAJC7Q99615 494 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 TUBGCP2Q9BSJ2 902 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 JRKLQ9Y4A0 524 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 CAPN6Q9Y6Q1 641 aa15.01□□□□□ -0.01
HDAC4-214ENST00000535493 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 GOLGA6BA6NDN3 693 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 NCK2O43639 380 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 RPS6KA5O75582 802 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 GTF2A1P52655 376 aaPredicted RBP15□□□□□ -0.01
HDAC4-214ENST00000535493 KCTD16Q68DU8 428 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CSGALNACT2Q8N6G5 542 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 CPVLQ9H3G5 476 aa15□□□□□ -0.01
HDAC4-214ENST00000535493 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms