RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-204ENST00000535406 SLC25A27O95847 323 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 HOXC6P09630 235 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
CDCA3-204ENST00000535406 CAPN2P17655 700 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 ADORA2AP29274 412 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 HAND2P61296 217 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 CCL14Q16627 93 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
CDCA3-204ENST00000535406 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
CDCA3-204ENST00000535406 NMT2O60551 498 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 TFRCP02786 760 aaKnown RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 FGRP09769 529 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 PCP11498 1178 aaKnown RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 COPB2P35606 906 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 PRPF38AQ8NAV1 312 aaKnown RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 KIFC2Q96AC6 838 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 CTDP1Q9Y5B0 961 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-204ENST00000535406 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
CDCA3-204ENST00000535406 FCER1AP12319 257 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 BMP3P12645 472 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 STAT3P40763 770 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 SLC1A4P43007 532 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 CACNB2Q08289 660 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-204ENST00000535406 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-204ENST00000535406 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 MFSD6Q6ZSS7 791 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 UBE2Q1Q7Z7E8 422 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 NPLOC4Q8TAT6 608 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 DSCC1Q9BVC3 393 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 FLRT1Q9NZU1 646 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 NEDD4P46934 1319 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 RAD50Q92878 1312 aa11.15□□□□□ -0.62
CDCA3-204ENST00000535406 FRMPD3Q5JV73 1810 aa11.15□□□□□ -0.63
CDCA3-204ENST00000535406 ZNF213O14771 459 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 ZBED4O75132 1171 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 STAT2P52630 851 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 KCTD2Q14681 263 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 SNRNP48Q6IEG0 339 aaKnown RBP11.14□□□□□ -0.63
CDCA3-204ENST00000535406 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 MMP19Q99542 508 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 HTATIP2Q9BUP3 242 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
CDCA3-204ENST00000535406 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 MCCP23508 829 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CCND3P30281 292 aaPredicted RBP11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CYP2C19P33261 490 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 NOVP48745 357 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 NT5C2P49902 561 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 OLFML2BQ68BL8 750 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 FAM160B2Q86V87 743 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CPXCR1Q8N123 301 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 ESR2Q92731 530 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 IL25Q9H293 177 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 TCP11L1Q9NUJ3 509 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 CTNNA3Q9UI47 895 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 PLXNA1Q9UIW2 1896 aa11.13□□□□□ -0.63
CDCA3-204ENST00000535406 COBLO75128 1261 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 FDX1P10109 184 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
CDCA3-204ENST00000535406 CNGA1P29973 690 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 SLC4A3P48751 1232 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 OAZ1P54368 228 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 KCTD1Q719H9 257 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 CHURC1Q8WUH1 139 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 DPF3Q92784 378 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 RAVER2Q9HCJ3 691 aaKnown RBP11.12□□□□□ -0.63
CDCA3-204ENST00000535406 OGDHLQ9ULD0 1010 aa11.12□□□□□ -0.63
CDCA3-204ENST00000535406 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
CDCA3-204ENST00000535406 MSCO60682 206 aa11.11□□□□□ -0.63
CDCA3-204ENST00000535406 PLA2G6O60733 806 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms