RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 SPATC1LQ9H0A9 340 aa9.41□□□□□ -0.9
CPSF7-214ENST00000535222 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
CPSF7-214ENST00000535222 PI4KBQ9UBF8 816 aa9.41□□□□□ -0.9
CPSF7-214ENST00000535222 MYO7AQ13402 2215 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 CTAGE5O15320 804 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
CPSF7-214ENST00000535222 LTBRP36941 435 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 ZEB1P37275 1124 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-214ENST00000535222 BTDP43251 543 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 CBX2Q14781 532 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-214ENST00000535222 PUM3Q15397 648 aaKnown RBP9.4□□□□□ -0.9
CPSF7-214ENST00000535222 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 SLF2Q8IX21 1173 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 MSL3Q8N5Y2 521 aaKnown RBP9.4□□□□□ -0.9
CPSF7-214ENST00000535222 KIAA1683Q9H0B3 1180 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 DNAJC18Q9H819 358 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 FAM184BQ9ULE4 1060 aa9.4□□□□□ -0.9
CPSF7-214ENST00000535222 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
CPSF7-214ENST00000535222 GRIN2DO15399 1336 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 LCHNA4D1U4 455 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 SEMA3EO15041 775 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 VCAM1P19320 739 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 USP14P54578 494 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 CTC1Q2NKJ3 1217 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 METTL24Q5JXM2 366 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 BEND3Q5T5X7 828 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 FOXP4Q8IVH2 680 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-214ENST00000535222 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
CPSF7-214ENST00000535222 DHX36Q9H2U1 1008 aaKnown RBP9.39□□□□□ -0.91
CPSF7-214ENST00000535222 HOXC10Q9NYD6 342 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 CTNNA3Q9UI47 895 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
CPSF7-214ENST00000535222 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
CPSF7-214ENST00000535222 SPEGQ15772 3267 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 NAV2Q8IVL1 2488 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 NCK2O43639 380 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 CABYRO75952 493 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 BAIAP3O94812 1187 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 FCER1AP12319 257 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 ACTN1P12814 892 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 RFC2P35250 354 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 GNAI1P63096 354 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 COG2Q14746 738 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-214ENST00000535222 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 MB21D1Q8N884 522 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 LPIN2Q92539 896 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
CPSF7-214ENST00000535222 SCLYQ96I15 445 aa9.38□□□□□ -0.91
CPSF7-214ENST00000535222 MROH7-TTC4A0A0A0MT08 1334 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 PDS5AQ29RF7 1337 aaKnown RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 LINC01553A4QN01 128 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 LOC730098B7Z3J9 87 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 GRM8O00222 908 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 MBTPS2O43462 519 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 B4GALT4O60513 344 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 SNAI1O95863 264 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 FLIIQ13045 1269 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 MAMDC4Q6UXC1 1216 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 FRMD5Q7Z6J6 570 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 ZGPATQ8N5A5 531 aaKnown RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 ZNF384Q8TF68 577 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 DENND2AQ9ULE3 1009 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 CNPY2Q9Y2B0 182 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
CPSF7-214ENST00000535222 GCN1Q92616 2671 aaKnown RBP9.37□□□□□ -0.91
CPSF7-214ENST00000535222 SIPA1L1O43166 1804 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 BPTFQ12830 3046 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 ADCY6O43306 1168 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 C6orf222P0C671 652 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-214ENST00000535222 ITGA7Q13683 1181 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 RAD9AQ99638 391 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 STK31Q9BXU1 1019 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 TRPV6Q9H1D0 765 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 MYH13Q9UKX3 1938 aa9.36□□□□□ -0.91
CPSF7-214ENST00000535222 STXBP3O00186 592 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 RUNDC1Q96C34 613 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 CDCA7LQ96GN5 454 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 RIPOR3Q96MK2 946 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 SIL1Q9H173 461 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-214ENST00000535222 GNL3LQ9NVN8 582 aaKnown RBP9.35□□□□□ -0.91
CPSF7-214ENST00000535222 RALYQ9UKM9 306 aaKnown RBP9.35□□□□□ -0.91
CPSF7-214ENST00000535222 SIP14410 1827 aa9.35□□□□□ -0.91
CPSF7-214ENST00000535222 GJB5O95377 273 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 GDF11O95390 407 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 EYA4O95677 639 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 SLC25A27O95847 323 aa9.34□□□□□ -0.91
CPSF7-214ENST00000535222 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-214ENST00000535222 SMAD4Q13485 552 aaKnown RBP9.34□□□□□ -0.91
CPSF7-214ENST00000535222 PTPROQ16827 1216 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms