RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 CATIPQ7Z7H3 387 aa24.02■■□□□ 1.44
CHFR-209ENST00000535181 SHCBP1Q8NEM2 672 aa24.02■■□□□ 1.44
CHFR-209ENST00000535181 TRIM47Q96LD4 638 aa24.02■■□□□ 1.44
CHFR-209ENST00000535181 MAP3K14Q99558 947 aa24.02■■□□□ 1.44
CHFR-209ENST00000535181 SPATC1LQ9H0A9 340 aa24.02■■□□□ 1.44
CHFR-209ENST00000535181 ZNF214Q9UL59 606 aaPredicted RBP24.02■■□□□ 1.44
CHFR-209ENST00000535181 ISY1Q9ULR0 285 aaKnown RBP24.02■■□□□ 1.44
CHFR-209ENST00000535181 PEX10O60683 326 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 DDAH1O94760 285 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 OAZ1P54368 228 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 PRMT2P55345 433 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 IKQ13123 557 aaPredicted RBP24.01■■□□□ 1.43
CHFR-209ENST00000535181 PKN2Q16513 984 aaKnown RBP24.01■■□□□ 1.43
CHFR-209ENST00000535181 ZSWIM6Q9HCJ5 1215 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 GPHNQ9NQX3 736 aaPredicted RBP24.01■■□□□ 1.43
CHFR-209ENST00000535181 PRR12Q9ULL5 1215 aa24.01■■□□□ 1.43
CHFR-209ENST00000535181 FRMPD2Q68DX3 1309 aaPredicted RBP24.01■■□□□ 1.43
CHFR-209ENST00000535181 ZBED4O75132 1171 aa24■■□□□ 1.43
CHFR-209ENST00000535181 PARP1P09874 1014 aaKnown RBP24■■□□□ 1.43
CHFR-209ENST00000535181 CASTP20810 708 aaKnown RBP24■■□□□ 1.43
CHFR-209ENST00000535181 RPS6KB1P23443 525 aa24■■□□□ 1.43
CHFR-209ENST00000535181 COPB2P35606 906 aa24■■□□□ 1.43
CHFR-209ENST00000535181 GRM4Q14833 912 aa24■■□□□ 1.43
CHFR-209ENST00000535181 SYDE2Q5VT97 1194 aa24■■□□□ 1.43
CHFR-209ENST00000535181 TTBK2Q6IQ55 1244 aa24■■□□□ 1.43
CHFR-209ENST00000535181 SAMD1Q6SPF0 538 aaPredicted RBP24■■□□□ 1.43
CHFR-209ENST00000535181 GPCPD1Q9NPB8 672 aa24■■□□□ 1.43
CHFR-209ENST00000535181 TRIM17Q9Y577 477 aa24■■□□□ 1.43
CHFR-209ENST00000535181 CCDC69A6NI79 296 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 TNPO2O14787 897 aaKnown RBP23.99■■□□□ 1.43
CHFR-209ENST00000535181 FMNL1O95466 1100 aaPredicted RBP23.99■■□□□ 1.43
CHFR-209ENST00000535181 SLC25A27O95847 323 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 HOXD10P28358 340 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 RUFY3Q7L099 469 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 RIOX2Q8IUF8 465 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 ZNF654Q8IZM8 581 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 CHMP4CQ96CF2 233 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 MOV10L1Q9BXT6 1211 aaKnown RBP23.99■■□□□ 1.43
CHFR-209ENST00000535181 TEX13BQ9BXU2 312 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 LRRC2Q9BYS8 371 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 PORCNQ9H237 461 aa23.99■■□□□ 1.43
CHFR-209ENST00000535181 PALM3A6NDB9 673 aaPredicted RBP23.98■■□□□ 1.43
CHFR-209ENST00000535181 GOLGA8HP0CJ92 632 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 CALM1P0DP23 149 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 CALM2P0DP24 149 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 CALM3P0DP25 149 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 STAT3P40763 770 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 COL13A1Q5TAT6 717 aaPredicted RBP23.98■■□□□ 1.43
CHFR-209ENST00000535181 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 COA7Q96BR5 231 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 AGXT2Q9BYV1 514 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 RANBP17Q9H2T7 1088 aaKnown RBP23.98■■□□□ 1.43
CHFR-209ENST00000535181 MROH8Q9H579 483 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 SRRDQ9UH36 339 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 MAD2L2Q9UI95 211 aa23.98■■□□□ 1.43
CHFR-209ENST00000535181 RCAN1P53805 252 aa23.97■■□□□ 1.43
CHFR-209ENST00000535181 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
CHFR-209ENST00000535181 TCEANC2Q96MN5 208 aa23.97■■□□□ 1.43
CHFR-209ENST00000535181 CTDP1Q9Y5B0 961 aaPredicted RBP23.97■■□□□ 1.43
CHFR-209ENST00000535181 SLC12A7Q9Y666 1083 aa23.97■■□□□ 1.43
CHFR-209ENST00000535181 CYP46A1Q9Y6A2 500 aa23.97■■□□□ 1.43
CHFR-209ENST00000535181 CPA1P15085 419 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 SLC16A2P36021 539 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 PLS1Q14651 629 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 GPR142Q7Z601 462 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 ZNF236Q9UL36 1845 aa23.96■■□□□ 1.43
CHFR-209ENST00000535181 ZNF536O15090 1300 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 ERCC3P19447 782 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 KIF5BP33176 963 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 FBXO46Q6PJ61 603 aaPredicted RBP23.95■■□□□ 1.42
CHFR-209ENST00000535181 Q6ZUG5 572 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 PLEKHH3Q7Z736 793 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 STAG2Q8N3U4 1231 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 SOCS4Q8WXH5 440 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 PTPN22Q9Y2R2 807 aa23.95■■□□□ 1.42
CHFR-209ENST00000535181 DOCK3Q8IZD9 2030 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 PLXNB2O15031 1838 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 KLRF2D3W0D1 207 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 STRNO43815 780 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 FGD1P98174 961 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
CHFR-209ENST00000535181 APOA5Q6Q788 366 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 SYNE3Q6ZMZ3 975 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.94■■□□□ 1.42
CHFR-209ENST00000535181 ABRAQ8N0Z2 381 aa23.94■■□□□ 1.42
CHFR-209ENST00000535181 CTCFLQ8NI51 663 aaPredicted RBP23.94■■□□□ 1.42
CHFR-209ENST00000535181 RAVER2Q9HCJ3 691 aaKnown RBP23.94■■□□□ 1.42
CHFR-209ENST00000535181 ICAM1P05362 532 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 SMARCA1P28370 1054 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 EVCP57679 992 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 PRKCZQ05513 592 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 IRF5Q13568 498 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 TKFCQ3LXA3 575 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 NCAPG2Q86XI2 1143 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 NUP133Q8WUM0 1156 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 MCOLN1Q9GZU1 580 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 UBA5Q9GZZ9 404 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 GJD2Q9UKL4 321 aa23.93■■□□□ 1.42
CHFR-209ENST00000535181 SLC15A5A6NIM6 579 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms