RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 BRMS1Q9HCU9 246 aa23.38■■□□□ 1.33
TNFRSF1A-205ENST00000534885 POLR3EQ9NVU0 708 aa23.38■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ADM5C9JUS6 153 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 BMP3P12645 472 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 TNFRSF25Q93038 417 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 PGBD1Q96JS3 809 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 WRNIP1Q96S55 665 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 GOPCQ9HD26 462 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ZNF112Q9UJU3 913 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 TOB1P50616 345 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 LINC00301Q8NCQ3 95 aa23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ZKSCAN4Q969J2 545 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1A-205ENST00000534885 CALML3P27482 149 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 NASPP49321 788 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 NAPAP54920 295 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ANO1Q5XXA6 986 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 USP50Q70EL3 339 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SULF1Q8IWU6 871 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 CCDC148Q8NFR7 591 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 VCPKMTQ9H867 229 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SCN4AP35499 1836 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 PNMA6FA0A0J9YX94 578 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 TMEM232C9JQI7 657 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 PPP1R11O60927 126 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SH2D4AQ9H788 454 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 PCDHA4Q9UN74 947 aa23.36■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SF3A1Q15459 793 aaKnown RBP23.35■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SUPT20HL1Q3ZLR7 823 aa23.35■■□□□ 1.33
TNFRSF1A-205ENST00000534885 BLIDQ8IZY5 108 aa23.35■■□□□ 1.33
TNFRSF1A-205ENST00000534885 COA7Q96BR5 231 aa23.35■■□□□ 1.33
TNFRSF1A-205ENST00000534885 GINM1Q9NU53 330 aa23.35■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ZBTB5O15062 677 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 IKQ13123 557 aaPredicted RBP23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 PRKG1Q13976 671 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 FAM83BQ5T0W9 1011 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 KRT26Q7Z3Y9 468 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 RASGRP4Q8TDF6 673 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 KLRG1Q96E93 195 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 ZMYND12Q9H0C1 365 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 POTECB2RU33 542 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 YEATS4O95619 227 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 STK38Q15208 465 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 RILPL1Q5EBL4 403 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 SCYL3Q8IZE3 742 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 FEZ1Q99689 392 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 TAF1DQ9H5J8 278 aaPredicted RBP23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 TMEM63CQ9P1W3 806 aa23.34■■□□□ 1.33
TNFRSF1A-205ENST00000534885 CCDC12Q8WUD4 166 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF1A-205ENST00000534885 hCG_1984214I3L0E3 225 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 M0R2N6 131 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SYDE2Q5VT97 1194 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ZNF713Q8N859 430 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 DAGLBQ8NCG7 672 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 GOLGA6L4A6NEF3 574 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SMCO2A6NFE2 343 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ATP2B1P20020 1258 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ME1P48163 572 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SNAP25P60880 206 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PTPAQ15257 358 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 CDC37Q16543 378 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 QRICH1Q2TAL8 776 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 EAPPQ56P03 285 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 BTNL9Q6UXG8 535 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PIK3AP1Q6ZUJ8 805 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 FAM177A1Q8N128 213 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PCDHB6Q9Y5E3 794 aa23.32■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SPTLC2O15270 562 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 STAT2P52630 851 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 DGKZQ13574 1117 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SLC39A14Q15043 492 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 GALNT17Q6IS24 598 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 KCNG4Q8TDN1 519 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ZC3H15Q8WU90 426 aaKnown RBP23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 WDR90Q96KV7 1748 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 WNT7AO00755 349 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 USP2O75604 605 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 KIAA1683Q9H0B3 1180 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PCDHA7Q9UN72 937 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PCDHA6Q9UN73 950 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PCDHA8Q9Y5H6 950 aa23.31■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PTPRAP18433 802 aa23.3■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PICK1Q9NRD5 415 aa23.3■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PRR12Q9ULL5 1215 aa23.3■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PHIPQ8WWQ0 1821 aa23.3■■□□□ 1.32
TNFRSF1A-205ENST00000534885 ESYT2A0FGR8 921 aa23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 LIG1P18858 919 aa23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 MARCKSP29966 332 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 MTMR2Q13614 643 aa23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.29■■□□□ 1.325e-7■■■□□ 16.6
TNFRSF1A-205ENST00000534885 BICD2Q8TD16 824 aa23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 C6orf50Q9HD87 102 aa23.29■■□□□ 1.32
TNFRSF1A-205ENST00000534885 GNA11P29992 359 aa23.28■■□□□ 1.32
TNFRSF1A-205ENST00000534885 SPP2Q13103 211 aa23.28■■□□□ 1.32
TNFRSF1A-205ENST00000534885 FBXO28Q9NVF7 368 aa23.28■■□□□ 1.32
TNFRSF1A-205ENST00000534885 OTOFQ9HC10 1997 aa23.28■■□□□ 1.32
TNFRSF1A-205ENST00000534885 PAPPA2Q9BXP8 1791 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms