RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 LEXMQ3ZCV2 418 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 EPHA10Q5JZY3 1008 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 ANKRD33Q7Z3H0 272 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 NPLOC4Q8TAT6 608 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 ATOH1Q92858 354 aaPredicted RBP12.68□□□□□ -0.38
TNC-209ENST00000534839 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
TNC-209ENST00000534839 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
TNC-209ENST00000534839 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
TNC-209ENST00000534839 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 IGKV5-2P06315 115 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 HERVK_113P62684 666 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 IRX3P78415 501 aaPredicted RBP12.67□□□□□ -0.38
TNC-209ENST00000534839 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 HHIPL2Q6UWX4 724 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 TOX2Q96NM4 488 aa12.67□□□□□ -0.38
TNC-209ENST00000534839 UBE2ZQ9H832 354 aaPredicted RBP12.67□□□□□ -0.38
TNC-209ENST00000534839 DMDP11532 3685 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.66□□□□□ -0.38
TNC-209ENST00000534839 APBB1O00213 710 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 WNT7AO00755 349 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 SEPT4O43236 478 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 CSF1RP07333 972 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 MRGPRX2Q96LB1 330 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
TNC-209ENST00000534839 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
TNC-209ENST00000534839 DOCK2Q92608 1830 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 CFAP47Q6ZTR5 3102 aa12.66□□□□□ -0.38
TNC-209ENST00000534839 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
TNC-209ENST00000534839 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 PRR23AA6NEV1 266 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 PROB1E7EW31 1015 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 FGBP02675 491 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 CA3P07451 260 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 HOXC6P09630 235 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 GRB10Q13322 594 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 C4orf48Q5BLP8 95 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 OTOP2Q7RTS6 562 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 BMP8AQ7Z5Y6 402 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 PAGR1Q9BTK6 254 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 MTIF3Q9H2K0 278 aaKnown RBP12.65□□□□□ -0.38
TNC-209ENST00000534839 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNC-209ENST00000534839 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
TNC-209ENST00000534839 RALYQ9UKM9 306 aaKnown RBP12.65□□□□□ -0.38
TNC-209ENST00000534839 DNAH14Q0VDD8 3507 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 HOXB7P09629 217 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 KCNA5P22460 613 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PPP2R1AP30153 589 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PRR20EP86478 221 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PRR20CP86479 221 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PRR20DP86480 221 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PRR20BP86481 221 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PRR20AP86496 221 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 ARNTL2Q8WYA1 636 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 PPP1R12CQ9BZL4 782 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 FKBPLQ9UIM3 349 aa12.64□□□□□ -0.39
TNC-209ENST00000534839 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
TNC-209ENST00000534839 H7C1W4 665 aa12.63□□□□□ -0.39
TNC-209ENST00000534839 LPXNO60711 386 aa12.63□□□□□ -0.39
TNC-209ENST00000534839 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
TNC-209ENST00000534839 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
TNC-209ENST00000534839 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
TNC-209ENST00000534839 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
TNC-209ENST00000534839 MAST3O60307 1309 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 ARHGEF15O94989 841 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 ZP2Q05996 745 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 RALBP1Q15311 655 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 DGLUCYQ7Z3D6 616 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 MAP3K2Q9Y2U5 619 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 SLC4A7Q9Y6M7 1214 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 ZNF536O15090 1300 aa12.62□□□□□ -0.39
TNC-209ENST00000534839 KMT2EQ8IZD2 1858 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 DDTLA6NHG4 134 aaPredicted RBP12.61□□□□□ -0.39
TNC-209ENST00000534839 CHL1O00533 1208 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 GLRX3O76003 335 aaKnown RBP12.61□□□□□ -0.39
TNC-209ENST00000534839 IRS1P35568 1242 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 ACAP1Q15027 740 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 WDR78Q5VTH9 848 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 SUGP1Q8IWZ8 645 aaKnown RBP12.61□□□□□ -0.39
TNC-209ENST00000534839 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 IRF2BPLQ9H1B7 796 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 XPNPEP3Q9NQH7 507 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 USP40Q9NVE5 1235 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 MUTYHQ9UIF7 546 aa12.61□□□□□ -0.39
TNC-209ENST00000534839 PTPRZ1P23471 2315 aaPredicted RBP12.6□□□□□ -0.39
TNC-209ENST00000534839 TRIOO75962 3097 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 H0Y858 1186 aa12.6□□□□□ -0.39
TNC-209ENST00000534839 SIAH2O43255 324 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms