RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 AKR1A1P14550 325 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 GNAT2P19087 354 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 KLRC3Q07444 240 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 PRPF38AQ8NAV1 312 aaKnown RBP14.97□□□□□ -0.01
USF1-211ENST00000534633 ZNF287Q9HBT7 754 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 UNC80Q8N2C7 3258 aa14.97□□□□□ -0.01
USF1-211ENST00000534633 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 NDUFB10O96000 172 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 ZNF865P0CJ78 1059 aaPredicted RBP14.96□□□□□ -0.01
USF1-211ENST00000534633 NUCB1Q02818 461 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 LRRFIP1Q32MZ4 808 aaKnown RBP14.96□□□□□ -0.01
USF1-211ENST00000534633 TSHZ3Q63HK5 1081 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 SNRNP48Q6IEG0 339 aaKnown RBP14.96□□□□□ -0.01
USF1-211ENST00000534633 B4GALNT3Q6L9W6 998 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 STK11IPQ8N1F8 1099 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 BADQ92934 168 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
USF1-211ENST00000534633 EPB41L4AQ9HCS5 686 aaPredicted RBP14.96□□□□□ -0.01
USF1-211ENST00000534633 SYNPO2Q9UMS6 1093 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 CNPY2Q9Y2B0 182 aa14.96□□□□□ -0.01
USF1-211ENST00000534633 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 DNAJC25-GNG10A0A024R161 153 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 IGKV6D-41A0A0C4DH26 115 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 PGK1P00558 417 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 TAL1P17542 331 aaPredicted RBP14.95□□□□□ -0.02
USF1-211ENST00000534633 TDO2P48775 406 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 TLE2Q04725 743 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 SHHQ15465 462 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 ZNF697Q5TEC3 545 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
USF1-211ENST00000534633 ZNF444Q8N0Y2 327 aaPredicted RBP14.95□□□□□ -0.02
USF1-211ENST00000534633 MKL1Q969V6 931 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 DDX11Q96FC9 970 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 GUCD1Q96NT3 240 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 CLIP2Q9UDT6 1046 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 TACC3Q9Y6A5 838 aa14.95□□□□□ -0.02
USF1-211ENST00000534633 CUL9Q8IWT3 2517 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 A0A1W2PQ45 241 aaPredicted RBP14.94□□□□□ -0.02
USF1-211ENST00000534633 A0A1W2PQY0 241 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 TRIM43BA6NCK2 446 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 ZBED4O75132 1171 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 ADAMTS4O75173 837 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 C9orf50Q5SZB4 431 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 MAMDC4Q6UXC1 1216 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 SH3RF1Q7Z6J0 888 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
USF1-211ENST00000534633 TRIM43Q96BQ3 446 aaPredicted RBP14.94□□□□□ -0.02
USF1-211ENST00000534633 TSEN34Q9BSV6 310 aaKnown RBP14.94□□□□□ -0.02
USF1-211ENST00000534633 MTMR4Q9NYA4 1195 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 RIPK3Q9Y572 518 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 CTDP1Q9Y5B0 961 aaPredicted RBP14.94□□□□□ -0.02
USF1-211ENST00000534633 PLIN4Q96Q06 1357 aa14.94□□□□□ -0.02
USF1-211ENST00000534633 TTC41PQ6P2S7 1318 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 SYNRGQ9UMZ2 1314 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
USF1-211ENST00000534633 M0R2C6 588 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 TTLL1O95922 423 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 APPP05067 770 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 CLTBP09497 229 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 CHD1LQ86WJ1 897 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 CPXCR1Q8N123 301 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 KIFC2Q96AC6 838 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 CEP95Q96GE4 821 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 LNPKQ9C0E8 428 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 SLC38A10Q9HBR0 1119 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 FEM1BQ9UK73 627 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 FAM184BQ9ULE4 1060 aa14.93□□□□□ -0.02
USF1-211ENST00000534633 MOXD2PA6NHM9 499 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 ERC2O15083 957 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 PRDM1O75626 825 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 SNAI1O95863 264 aaPredicted RBP14.92□□□□□ -0.02
USF1-211ENST00000534633 FDX1P10109 184 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 OAZ1P54368 228 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 SMAD3P84022 425 aaKnown RBP14.92□□□□□ -0.02
USF1-211ENST00000534633 PDE4BQ07343 736 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 GMCL1P1Q8NEA9 526 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 NUP133Q8WUM0 1156 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 LENG1Q96BZ8 264 aaPredicted RBP14.92□□□□□ -0.02
USF1-211ENST00000534633 FAM161BQ96MY7 647 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
USF1-211ENST00000534633 EYSQ5T1H1 3165 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 DUSP11O75319 330 aaKnown RBP14.91□□□□□ -0.02
USF1-211ENST00000534633 SLC3A2P08195 630 aaKnown RBP14.91□□□□□ -0.02
USF1-211ENST00000534633 TSPY3P0CV98 308 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 TSPY8P0CW00 308 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 RAG1P15918 1043 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 ITGB8P26012 769 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 ACLYP53396 1101 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 ANKRD33Q7Z3H0 272 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 ANKRD35Q8N283 1001 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 KLHDC9Q8NEP7 349 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 CHST13Q8NET6 341 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 NEDD1Q8NHV4 660 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 TOX2Q96NM4 488 aa14.91□□□□□ -0.02
USF1-211ENST00000534633 RAVER2Q9HCJ3 691 aaKnown RBP14.91□□□□□ -0.02
USF1-211ENST00000534633 STARD7Q9NQZ5 370 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms